RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 HMGA1P17096 107 aaKnown RBP22.94■■□□□ 1.26
CCDC78-215ENST00000538176 LMO2P25791 158 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 NLRP12P59046 1061 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 PLCB2Q00722 1185 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 GRM2Q14416 872 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 ANGPT1Q15389 498 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 SGSM1Q2NKQ1 1148 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 ARHGAP29Q52LW3 1261 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 TPRG1Q6ZUI0 275 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 OR6B3Q8NGW1 331 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 MYCBPAPQ8TBZ2 947 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 CSGALNACT1Q8TDX6 532 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 MRPS31Q92665 395 aaKnown RBP22.94■■□□□ 1.26
CCDC78-215ENST00000538176 TAF4BQ92750 862 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 MKNK1Q9BUB5 465 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 GZF1Q9H116 711 aaPredicted RBP22.94■■□□□ 1.26
CCDC78-215ENST00000538176 LTB4R2Q9NPC1 389 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 HEBP1Q9NRV9 189 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 THG1LQ9NWX6 298 aaKnown RBP22.94■■□□□ 1.26
CCDC78-215ENST00000538176 DLGAP2Q9P1A6 1054 aa22.94■■□□□ 1.26
CCDC78-215ENST00000538176 LRRIQ3A6PVS8 624 aaPredicted RBP22.93■■□□□ 1.26
CCDC78-215ENST00000538176 PROB1E7EW31 1015 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 NRG2O14511 850 aaPredicted RBP22.93■■□□□ 1.26
CCDC78-215ENST00000538176 NOL4O94818 638 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 PRR29P0C7W0 189 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 AVPR1AP37288 418 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 MYL6P60660 151 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 NCOA4Q13772 614 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 UBXN2BQ14CS0 331 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 ZNF667Q5HYK9 610 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 CEP135Q66GS9 1140 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 INTS8Q75QN2 995 aaKnown RBP22.93■■□□□ 1.26
CCDC78-215ENST00000538176 CMTM8Q8IZV2 173 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 CELF5Q8N6W0 485 aaKnown RBP22.93■■□□□ 1.26
CCDC78-215ENST00000538176 SPATA17Q96L03 361 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 GSDMAQ96QA5 445 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 XYLT2Q9H1B5 865 aa22.93■■□□□ 1.26
CCDC78-215ENST00000538176 TRIM66O15016 1216 aa22.92■■□□□ 1.26
CCDC78-215ENST00000538176 DCNP07585 359 aaKnown RBP22.92■■□□□ 1.26
CCDC78-215ENST00000538176 PDGFRBP09619 1106 aa22.92■■□□□ 1.26
CCDC78-215ENST00000538176 NR2F2P24468 414 aa22.92■■□□□ 1.26
CCDC78-215ENST00000538176 NBL1P41271 181 aa22.92■■□□□ 1.26
CCDC78-215ENST00000538176 RPS9P46781 194 aaKnown RBP22.92■■□□□ 1.26
CCDC78-215ENST00000538176 DDR2Q16832 855 aa22.92■■□□□ 1.26
CCDC78-215ENST00000538176 TDRD10Q5VZ19 366 aaKnown RBP22.92■■□□□ 1.26
CCDC78-215ENST00000538176 C1orf210Q8IVY1 113 aa22.92■■□□□ 1.26
CCDC78-215ENST00000538176 FMR1NBQ8N0W7 255 aaPredicted RBP22.92■■□□□ 1.26
CCDC78-215ENST00000538176 BPIFB1Q8TDL5 484 aa22.92■■□□□ 1.26
CCDC78-215ENST00000538176 TIGD1Q96MW7 591 aa22.92■■□□□ 1.26
CCDC78-215ENST00000538176 SLC46A2Q9BY10 475 aa22.92■■□□□ 1.26
CCDC78-215ENST00000538176 FOXQ1Q9C009 403 aa22.92■■□□□ 1.26
CCDC78-215ENST00000538176 C8orf33Q9H7E9 229 aaPredicted RBP22.92■■□□□ 1.26
CCDC78-215ENST00000538176 KIF9Q9HAQ2 790 aa22.92■■□□□ 1.26
CCDC78-215ENST00000538176 NXF1Q9UBU9 619 aaKnown RBP22.92■■□□□ 1.26
CCDC78-215ENST00000538176 MAGED2Q9UNF1 606 aaPredicted RBP22.92■■□□□ 1.26
CCDC78-215ENST00000538176 SLC38A8A6NNN8 435 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 A8MXQ7 604 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 SMC2O95347 1197 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 KRT13P13646 458 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 TRIM21P19474 475 aaKnown RBP22.91■■□□□ 1.26
CCDC78-215ENST00000538176 ANXA13P27216 316 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 PSMC2P35998 433 aaKnown RBP22.91■■□□□ 1.26
CCDC78-215ENST00000538176 GRIK1P39086 918 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 CASP4P49662 377 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 FAM160A1Q05DH4 1040 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 ADAM9Q13443 819 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 ZNF699Q32M78 642 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 EDRF1Q3B7T1 1238 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 ZACNQ401N2 412 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 STXBP5Q5T5C0 1151 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 MON1AQ86VX9 555 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 SCN4BQ8IWT1 228 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 ELOA2Q8IYF1 753 aaPredicted RBP22.91■■□□□ 1.26
CCDC78-215ENST00000538176 PLEKHO2Q8TD55 490 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 CLDN23Q96B33 292 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 TNIP3Q96KP6 325 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 MRPL45Q9BRJ2 306 aaKnown RBP22.91■■□□□ 1.26
CCDC78-215ENST00000538176 IER2Q9BTL4 223 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 SEMA4AQ9H3S1 761 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 CRTAC1Q9NQ79 661 aa22.91■■□□□ 1.26
CCDC78-215ENST00000538176 ATP2C2O75185 946 aa22.9■■□□□ 1.26
CCDC78-215ENST00000538176 PFKLP17858 780 aa22.9■■□□□ 1.26
CCDC78-215ENST00000538176 PTPN1P18031 435 aaKnown RBP22.9■■□□□ 1.26
CCDC78-215ENST00000538176 PPP3CCP48454 512 aa22.9■■□□□ 1.26
CCDC78-215ENST00000538176 PDE6CP51160 858 aa22.9■■□□□ 1.26
CCDC78-215ENST00000538176 VAMP7P51809 220 aa22.9■■□□□ 1.26
CCDC78-215ENST00000538176 CYP4F8P98187 520 aa22.9■■□□□ 1.26
CCDC78-215ENST00000538176 CYP27A1Q02318 531 aa22.9■■□□□ 1.26
CCDC78-215ENST00000538176 TMEM150AQ86TG1 271 aa22.9■■□□□ 1.26
CCDC78-215ENST00000538176 MYLPFQ96A32 169 aa22.9■■□□□ 1.26
CCDC78-215ENST00000538176 PCED1BQ96HM7 432 aa22.9■■□□□ 1.26
CCDC78-215ENST00000538176 ARNTLO00327 626 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 BDNFP23560 247 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 CDR1P51861 262 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 PSMC1P62191 440 aaKnown RBP22.89■■□□□ 1.25
CCDC78-215ENST00000538176 ZNF268Q14587 947 aaPredicted RBP22.89■■□□□ 1.25
CCDC78-215ENST00000538176 COBLL1Q53SF7 1204 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 DENND5BQ6ZUT9 1274 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 SV2AQ7L0J3 742 aa22.89■■□□□ 1.25
CCDC78-215ENST00000538176 MAB21L3Q8N8X9 362 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms