RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 EFHBQ8N7U6 833 aa13.68□□□□□ -0.22
PEX11B-203ENST00000537888 VN1R2Q8NFZ6 395 aa13.68□□□□□ -0.22
PEX11B-203ENST00000537888 IGSF21Q96ID5 467 aa13.68□□□□□ -0.22
PEX11B-203ENST00000537888 MS4A14Q96JA4 679 aa13.68□□□□□ -0.22
PEX11B-203ENST00000537888 NECAB3Q96P71 396 aaPredicted RBP13.68□□□□□ -0.22
PEX11B-203ENST00000537888 UHRF1Q96T88 793 aaPredicted RBP13.68□□□□□ -0.22
PEX11B-203ENST00000537888 TCF25Q9BQ70 676 aa13.68□□□□□ -0.22
PEX11B-203ENST00000537888 TMEM175Q9BSA9 504 aa13.68□□□□□ -0.22
PEX11B-203ENST00000537888 TRIM6Q9C030 488 aaPredicted RBP13.68□□□□□ -0.22
PEX11B-203ENST00000537888 OSGEPQ9NPF4 335 aa13.68□□□□□ -0.22
PEX11B-203ENST00000537888 RBM12Q9NTZ6 932 aaKnown RBP13.68□□□□□ -0.22
PEX11B-203ENST00000537888 SEPT11Q9NVA2 429 aaKnown RBP13.68□□□□□ -0.22
PEX11B-203ENST00000537888 MIOSQ9NXC5 875 aa13.68□□□□□ -0.22
PEX11B-203ENST00000537888 KANSL3Q9P2N6 904 aa13.68□□□□□ -0.22
PEX11B-203ENST00000537888 CPSF3Q9UKF6 684 aaKnown RBP13.68□□□□□ -0.22
PEX11B-203ENST00000537888 PACSIN2Q9UNF0 486 aaPredicted RBP13.68□□□□□ -0.22
PEX11B-203ENST00000537888 TCF20Q9UGU0 1960 aaKnown RBP13.67□□□□□ -0.22
PEX11B-203ENST00000537888 CARNS1A5YM72 827 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 HIDE1A8MVS5 230 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 KCNK3O14649 394 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 EFEMP2O95967 443 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 MMEP08473 750 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 ACO1P21399 889 aaKnown RBP13.67□□□□□ -0.22
PEX11B-203ENST00000537888 ABCB4P21439 1286 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 AKAP5P24588 427 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 MATR3P43243 847 aaKnown RBP eCLIP13.67□□□□□ -0.22
PEX11B-203ENST00000537888 NRIP1P48552 1158 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 KRT17Q04695 432 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 RNASELQ05823 741 aaKnown RBP13.67□□□□□ -0.22
PEX11B-203ENST00000537888 DUSP6Q16828 381 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 PLPP4Q5VZY2 271 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 MPZL3Q6UWV2 235 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 COLGALT2Q8IYK4 626 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 PPP2R3CQ969Q6 453 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 TMEM169Q96HH4 297 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 MSLNLQ96KJ4 702 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 LRRC1Q9BTT6 524 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 PI4K2AQ9BTU6 479 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 APOL6Q9BWW8 343 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 ZBP1Q9H171 429 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 NGRNQ9NPE2 291 aaKnown RBP13.67□□□□□ -0.22
PEX11B-203ENST00000537888 MARCH5Q9NX47 278 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 CLEC1BQ9P126 229 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 GTF3C4Q9UKN8 822 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 TNFSF13BQ9Y275 285 aa13.67□□□□□ -0.22
PEX11B-203ENST00000537888 GRXCR2A6NFK2 248 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 DDX3YO15523 660 aaKnown RBP13.66□□□□□ -0.22
PEX11B-203ENST00000537888 CLTAP09496 248 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 CBX1P83916 185 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 BIRC3Q13489 604 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 CUL2Q13617 745 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 CLEC16AQ2KHT3 1053 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 ACAD10Q6JQN1 1059 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 RBM23Q86U06 439 aaKnown RBP13.66□□□□□ -0.22
PEX11B-203ENST00000537888 HACE1Q8IYU2 909 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 IGFLR1Q9H665 355 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 TLE6Q9H808 572 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 VIPAS39Q9H9C1 493 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 APOBEC3GQ9HC16 384 aaKnown RBP13.66□□□□□ -0.22
PEX11B-203ENST00000537888 SMARCAL1Q9NZC9 954 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 EHD2Q9NZN4 543 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 UVRAGQ9P2Y5 699 aa13.66□□□□□ -0.22
PEX11B-203ENST00000537888 MIF4GDA9UHW6 222 aaKnown RBP13.65□□□□□ -0.22
PEX11B-203ENST00000537888 PGRMC1O00264 195 aaKnown RBP13.65□□□□□ -0.22
PEX11B-203ENST00000537888 PTGESO14684 152 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 NRP1O14786 923 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 PER2O15055 1255 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 IL9P15248 144 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 TNNC1P63316 161 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 CLUL1Q15846 466 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 ATF7IP2Q5U623 682 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 TAF3Q5VWG9 929 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 LMBRD2Q68DH5 695 aaPredicted RBP13.65□□□□□ -0.22
PEX11B-203ENST00000537888 PTCRAQ6ISU1 281 aaPredicted RBP13.65□□□□□ -0.22
PEX11B-203ENST00000537888 PPP1R2P3Q6NXS1 205 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 TRIM72Q6ZMU5 477 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
PEX11B-203ENST00000537888 RNF168Q8IYW5 571 aaPredicted RBP13.65□□□□□ -0.22
PEX11B-203ENST00000537888 UBR7Q8N806 425 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 MRPL43Q8N983 215 aaKnown RBP13.65□□□□□ -0.22
PEX11B-203ENST00000537888 OR5B17Q8NGF7 314 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 MICAL1Q8TDZ2 1067 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 CDCA3Q99618 268 aaPredicted RBP13.65□□□□□ -0.22
PEX11B-203ENST00000537888 ARID3AQ99856 593 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 CARD9Q9H257 536 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 CXCL16Q9H2A7 254 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 ENTPD7Q9NQZ7 604 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 SNTG2Q9NY99 539 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 STIM2Q9P246 746 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 IRAK3Q9Y616 596 aa13.65□□□□□ -0.22
PEX11B-203ENST00000537888 C2orf71A6NGG8 1288 aa13.64□□□□□ -0.23
PEX11B-203ENST00000537888 CCDC188H7C350 402 aa13.64□□□□□ -0.23
PEX11B-203ENST00000537888 RECQL4O94761 1208 aa13.64□□□□□ -0.23
PEX11B-203ENST00000537888 ASS1P00966 412 aaKnown RBP13.64□□□□□ -0.23
PEX11B-203ENST00000537888 CTSAP10619 480 aa13.64□□□□□ -0.23
PEX11B-203ENST00000537888 UNGP13051 313 aaPredicted RBP13.64□□□□□ -0.23
PEX11B-203ENST00000537888 KRT5P13647 590 aa13.64□□□□□ -0.23
PEX11B-203ENST00000537888 NOP14P78316 857 aaKnown RBP13.64□□□□□ -0.23
PEX11B-203ENST00000537888 GRIK3Q13003 919 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms