RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 MAGEC2Q9UBF1 373 aaPredicted RBP15.81■□□□□ 0.12
USP28-204ENST00000537642 ZNF638Q14966 1978 aaKnown RBP15.8■□□□□ 0.12
USP28-204ENST00000537642 COL4A2P08572 1712 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 HEPACAM2A8MVW5 462 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 GALR2O43603 387 aaPredicted RBP15.8■□□□□ 0.12
USP28-204ENST00000537642 NOL4O94818 638 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 F11P03951 625 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 TRIM49P0CI25 452 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 TRIM49CP0CI26 452 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 CSH1P0DML2 217 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 CSH2P0DML3 217 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 PSMC3P17980 439 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 PSMC2P35998 433 aaKnown RBP15.8■□□□□ 0.12
USP28-204ENST00000537642 MAGEA11P43364 429 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 RAP1GAPP47736 663 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 PTPN5P54829 565 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 CDH8P55286 799 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 NLRP12P59046 1061 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 NHLH1Q02575 133 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 MAPRE1Q15691 268 aaKnown RBP15.8■□□□□ 0.12
USP28-204ENST00000537642 MLF2Q15773 248 aaPredicted RBP15.8■□□□□ 0.12
USP28-204ENST00000537642 EDRF1Q3B7T1 1238 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 ARHGAP15Q53QZ3 475 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 ZNF667Q5HYK9 610 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 MDH1BQ5I0G3 518 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 INTS8Q75QN2 995 aaKnown RBP15.8■□□□□ 0.12
USP28-204ENST00000537642 GPIHBP1Q8IV16 184 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 ARID3BQ8IVW6 561 aaPredicted RBP15.8■□□□□ 0.12
USP28-204ENST00000537642 ELOA2Q8IYF1 753 aaPredicted RBP15.8■□□□□ 0.12
USP28-204ENST00000537642 MYCBPAPQ8TBZ2 947 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 EEF2KMTQ96G04 330 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 PCED1BQ96HM7 432 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 GCNAQ96QF7 691 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 TRMT61BQ9BVS5 477 aaKnown RBP15.8■□□□□ 0.12
USP28-204ENST00000537642 SDCBP2Q9H190 292 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 DPEP3Q9H4B8 488 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 TASP1Q9H6P5 420 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 HOOK1Q9UJC3 728 aaKnown RBP15.8■□□□□ 0.12
USP28-204ENST00000537642 MAGED2Q9UNF1 606 aaPredicted RBP15.8■□□□□ 0.12
USP28-204ENST00000537642 MIA3Q5JRA6 1907 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 TICRRQ7Z2Z1 1910 aa15.8■□□□□ 0.12
USP28-204ENST00000537642 ANAPC1Q9H1A4 1944 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 SLC38A8A6NNN8 435 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 A8MXQ7 604 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 HLA-DRAP01903 254 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 KRT13P13646 458 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 PTPN1P18031 435 aaKnown RBP15.79■□□□□ 0.12
USP28-204ENST00000537642 RFX1P22670 979 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 BDNFP23560 247 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 MCCD1P59942 119 aaPredicted RBP15.79■□□□□ 0.12
USP28-204ENST00000537642 CYP27A1Q02318 531 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 ENPEPQ07075 957 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 PPP3CAQ08209 521 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 SGSM1Q2NKQ1 1148 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 VSTM1Q6UX27 236 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 SCARA5Q6ZMJ2 495 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 MFSD6LQ8IWD5 586 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 SCN4BQ8IWT1 228 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 DEPDC1BQ8WUY9 529 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 DNASE1L2Q92874 299 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 E2F7Q96AV8 911 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 SHDQ96IW2 340 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 DDX23Q9BUQ8 820 aaKnown RBP15.79■□□□□ 0.12
USP28-204ENST00000537642 SLC46A2Q9BY10 475 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 FOXQ1Q9C009 403 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 BRD9Q9H8M2 597 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 F5P12259 2224 aa15.79■□□□□ 0.12
USP28-204ENST00000537642 KINO60870 393 aaKnown RBP15.78■□□□□ 0.12
USP28-204ENST00000537642 TADA3O75528 432 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 CLSTN1O94985 981 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 PRAMEF12O95522 483 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 ASS1P00966 412 aaKnown RBP15.78■□□□□ 0.12
USP28-204ENST00000537642 WEE1P30291 646 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 GDI1P31150 447 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 PIK3CAP42336 1068 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 GCLMP48507 274 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 PMS1P54277 932 aaKnown RBP15.78■□□□□ 0.12
USP28-204ENST00000537642 PRKCQQ04759 706 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 SPOPLQ6IQ16 392 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 CCDC105Q8IYK2 499 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 ADSSL1Q8N142 457 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 B3GALNT2Q8NCR0 500 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 TAF4BQ92750 862 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 TRMT2BQ96GJ1 504 aaKnown RBP15.78■□□□□ 0.12
USP28-204ENST00000537642 MYRFLQ96LU7 910 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 LRRC3BQ96PB8 259 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 HEBP1Q9NRV9 189 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 CHMP5Q9NZZ3 219 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 UXTQ9UBK9 157 aaPredicted RBP15.78■□□□□ 0.12
USP28-204ENST00000537642 MAN1B1Q9UKM7 699 aa15.78■□□□□ 0.12
USP28-204ENST00000537642 KANSL1LA0AUZ9 987 aa15.77■□□□□ 0.12
USP28-204ENST00000537642 SHISA7A6NL88 538 aa15.77■□□□□ 0.12
USP28-204ENST00000537642 CETN3O15182 167 aa15.77■□□□□ 0.12
USP28-204ENST00000537642 DCNP07585 359 aaKnown RBP15.77■□□□□ 0.12
USP28-204ENST00000537642 CD72P21854 359 aa15.77■□□□□ 0.12
USP28-204ENST00000537642 CACNA2D1P54289 1103 aa15.77■□□□□ 0.12
USP28-204ENST00000537642 FCHO2Q0JRZ9 810 aa15.77■□□□□ 0.12
USP28-204ENST00000537642 ANKRD40Q6AI12 368 aa15.77■□□□□ 0.12
USP28-204ENST00000537642 ISM2Q6H9L7 571 aa15.77■□□□□ 0.12
USP28-204ENST00000537642 TPRG1Q6ZUI0 275 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms