RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CPT1BQ92523 772 aa15.05■□□□□ 0
USP44-203ENST00000537435 STAMBPL1Q96FJ0 436 aa15.05■□□□□ 0
USP44-203ENST00000537435 MAK16Q9BXY0 300 aaKnown RBP15.05■□□□□ 0
USP44-203ENST00000537435 MYLK2Q9H1R3 596 aa15.05■□□□□ 0
USP44-203ENST00000537435 NXF1Q9UBU9 619 aaKnown RBP15.05■□□□□ 0
USP44-203ENST00000537435 CYTH4Q9UIA0 394 aa15.05■□□□□ 0
USP44-203ENST00000537435 POLIQ9UNA4 740 aa15.05■□□□□ 0
USP44-203ENST00000537435 SIGLEC16A6NMB1 481 aa15.05■□□□□ -0
USP44-203ENST00000537435 TYROBPO43914 113 aa15.05■□□□□ -0
USP44-203ENST00000537435 POLR2BP30876 1174 aaKnown RBP15.05■□□□□ -0
USP44-203ENST00000537435 MSH2P43246 934 aa15.05■□□□□ -0
USP44-203ENST00000537435 IRX3P78415 501 aaPredicted RBP15.05■□□□□ -0
USP44-203ENST00000537435 MOGSQ13724 837 aa15.05■□□□□ -0
USP44-203ENST00000537435 EFTUD2Q15029 972 aaKnown RBP eCLIP15.05■□□□□ -0
USP44-203ENST00000537435 RASA2Q15283 850 aa15.05■□□□□ -0
USP44-203ENST00000537435 EFHC2Q5JST6 749 aa15.05■□□□□ -0
USP44-203ENST00000537435 CDCA2Q69YH5 1023 aaPredicted RBP15.05■□□□□ -0
USP44-203ENST00000537435 ZBTB8OSQ8IWT0 167 aa15.05■□□□□ -0
USP44-203ENST00000537435 PPIL6Q8IXY8 311 aa15.05■□□□□ -0
USP44-203ENST00000537435 LRRC8CQ8TDW0 803 aa15.05■□□□□ -0
USP44-203ENST00000537435 PPCSQ9HAB8 311 aa15.05■□□□□ -0
USP44-203ENST00000537435 A0A1B0GUA9 196 aa15.04■□□□□ -0
USP44-203ENST00000537435 EDF1O60869 148 aaKnown RBP15.04■□□□□ -0
USP44-203ENST00000537435 ITGBL1O95965 494 aaPredicted RBP15.04■□□□□ -0
USP44-203ENST00000537435 KRT7P08729 469 aa15.04■□□□□ -0
USP44-203ENST00000537435 SSTR1P30872 391 aa15.04■□□□□ -0
USP44-203ENST00000537435 RAP1GAPP47736 663 aa15.04■□□□□ -0
USP44-203ENST00000537435 GEMIN4P57678 1058 aaKnown RBP15.04■□□□□ -0
USP44-203ENST00000537435 YWHAEP62258 255 aaKnown RBP15.04■□□□□ -0
USP44-203ENST00000537435 TFDP1Q14186 410 aa15.04■□□□□ -0
USP44-203ENST00000537435 SETDB1Q15047 1291 aa15.04■□□□□ -0
USP44-203ENST00000537435 HADHQ16836 314 aaKnown RBP15.04■□□□□ -0
USP44-203ENST00000537435 MSS51Q4VC12 460 aa15.04■□□□□ -0
USP44-203ENST00000537435 FNBP1LQ5T0N5 605 aa15.04■□□□□ -0
USP44-203ENST00000537435 RHPN2Q8IUC4 686 aa15.04■□□□□ -0
USP44-203ENST00000537435 TAB3Q8N5C8 712 aaPredicted RBP15.04■□□□□ -0
USP44-203ENST00000537435 PYROXD1Q8WU10 500 aa15.04■□□□□ -0
USP44-203ENST00000537435 ERP27Q96DN0 273 aa15.04■□□□□ -0
USP44-203ENST00000537435 ZNF668Q96K58 619 aaPredicted RBP15.04■□□□□ -0
USP44-203ENST00000537435 CXorf56Q9H5V9 222 aa15.04■□□□□ -0
USP44-203ENST00000537435 ETNK1Q9HBU6 452 aa15.04■□□□□ -0
USP44-203ENST00000537435 RABGEF1Q9UJ41 708 aa15.04■□□□□ -0
USP44-203ENST00000537435 EFR3BQ9Y2G0 817 aa15.04■□□□□ -0
USP44-203ENST00000537435 SNCAIPQ9Y6H5 919 aa15.04■□□□□ -0
USP44-203ENST00000537435 USH1CQ9Y6N9 552 aa15.04■□□□□ -0
USP44-203ENST00000537435 TNNC2P02585 160 aa15.04■□□□□ -0
USP44-203ENST00000537435 CD48P09326 243 aa15.04■□□□□ -0
USP44-203ENST00000537435 KDELR1P24390 212 aa15.04■□□□□ -0
USP44-203ENST00000537435 ELF1P32519 619 aa15.04■□□□□ -0
USP44-203ENST00000537435 YARSP54577 528 aaKnown RBP15.04■□□□□ -0
USP44-203ENST00000537435 ARL4CP56559 192 aa15.04■□□□□ -0
USP44-203ENST00000537435 PSMC1P62191 440 aaKnown RBP15.04■□□□□ -0
USP44-203ENST00000537435 PRKG1Q13976 671 aa15.04■□□□□ -0
USP44-203ENST00000537435 LY6KQ17RY6 165 aa15.04■□□□□ -0
USP44-203ENST00000537435 HHATQ5VTY9 493 aa15.04■□□□□ -0
USP44-203ENST00000537435 BBS12Q6ZW61 710 aa15.04■□□□□ -0
USP44-203ENST00000537435 EMC1Q8N766 993 aa15.04■□□□□ -0
USP44-203ENST00000537435 CEP120Q8N960 986 aa15.04■□□□□ -0
USP44-203ENST00000537435 NAT8LQ8N9F0 302 aa15.04■□□□□ -0
USP44-203ENST00000537435 TTC13Q8NBP0 860 aa15.04■□□□□ -0
USP44-203ENST00000537435 RSAD2Q8WXG1 361 aa15.04■□□□□ -0
USP44-203ENST00000537435 ANKRD36BP1Q96IX9 119 aa15.04■□□□□ -0
USP44-203ENST00000537435 EBF2Q9HAK2 575 aa15.04■□□□□ -0
USP44-203ENST00000537435 CHKBQ9Y259 395 aa15.04■□□□□ -0
USP44-203ENST00000537435 SOWAHBA6NEL2 793 aa15.03■□□□□ -0
USP44-203ENST00000537435 PIAS1O75925 651 aa15.03■□□□□ -0
USP44-203ENST00000537435 KRT4P19013 534 aa15.03■□□□□ -0
USP44-203ENST00000537435 PHBP35232 272 aa15.03■□□□□ -0
USP44-203ENST00000537435 RPL22P35268 128 aaKnown RBP15.03■□□□□ -0
USP44-203ENST00000537435 HIRAP54198 1017 aaPredicted RBP15.03■□□□□ -0
USP44-203ENST00000537435 LVRNQ6Q4G3 990 aa15.03■□□□□ -0
USP44-203ENST00000537435 CDR2LQ86X02 465 aaPredicted RBP15.03■□□□□ -0
USP44-203ENST00000537435 VSIG1Q86XK7 387 aa15.03■□□□□ -0
USP44-203ENST00000537435 TRIM50Q86XT4 487 aa15.03■□□□□ -0
USP44-203ENST00000537435 APOBEC3FQ8IUX4 373 aaKnown RBP15.03■□□□□ -0
USP44-203ENST00000537435 ATP11CQ8NB49 1132 aa15.03■□□□□ -0
USP44-203ENST00000537435 N4BP2L2Q92802 583 aaPredicted RBP15.03■□□□□ -0
USP44-203ENST00000537435 L3MBTL3Q96JM7 780 aaPredicted RBP15.03■□□□□ -0
USP44-203ENST00000537435 WDR83Q9BRX9 315 aaKnown RBP15.03■□□□□ -0
USP44-203ENST00000537435 LHX5Q9H2C1 402 aa15.03■□□□□ -0
USP44-203ENST00000537435 METTL5Q9NRN9 209 aaKnown RBP15.03■□□□□ -0
USP44-203ENST00000537435 TXLNGQ9NUQ3 528 aa15.03■□□□□ -0
USP44-203ENST00000537435 KRT19P08727 400 aa15.03■□□□□ -0
USP44-203ENST00000537435 EDNRBP24530 442 aa15.03■□□□□ -0
USP44-203ENST00000537435 ORC1Q13415 861 aa15.03■□□□□ -0
USP44-203ENST00000537435 MTM1Q13496 603 aa15.03■□□□□ -0
USP44-203ENST00000537435 MXD4Q14582 209 aaPredicted RBP15.03■□□□□ -0
USP44-203ENST00000537435 MPZL3Q6UWV2 235 aa15.03■□□□□ -0
USP44-203ENST00000537435 METTL7BQ6UX53 244 aa15.03■□□□□ -0
USP44-203ENST00000537435 LBX2Q6XYB7 198 aa15.03■□□□□ -0
USP44-203ENST00000537435 C3orf62Q6ZUJ4 267 aa15.03■□□□□ -0
USP44-203ENST00000537435 FNIP1Q8TF40 1166 aa15.03■□□□□ -0
USP44-203ENST00000537435 FAM167AQ96KS9 214 aa15.03■□□□□ -0
USP44-203ENST00000537435 CPXM1Q96SM3 734 aa15.03■□□□□ -0
USP44-203ENST00000537435 BTBD7Q9P203 1132 aa15.03■□□□□ -0
USP44-203ENST00000537435 PCSK1NQ9UHG2 260 aa15.03■□□□□ -0
USP44-203ENST00000537435 TCRBV7S3A2A0A539 114 aa15.02■□□□□ -0
USP44-203ENST00000537435 MED7O43513 233 aa15.02■□□□□ -0
USP44-203ENST00000537435 ANP32DO95626 131 aa15.02■□□□□ -0
USP44-203ENST00000537435 RPSAP08865 295 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms