RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 K7ENP7 123 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 F11P03951 625 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 MS4A1P11836 297 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 NDUFV2P19404 249 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 CDC25CP30307 473 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 WASP42768 502 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 GRK6P43250 576 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 IFNAR2P48551 515 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 IL9RQ01113 521 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 POU5F1BQ06416 359 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 FUT2Q10981 343 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 MXD4Q14582 209 aaPredicted RBP10.38□□□□□ -0.75
CPSF7-217ENST00000537162 SYCP2LQ5T4T6 812 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 INO80CQ6PI98 192 aaPredicted RBP10.38□□□□□ -0.75
CPSF7-217ENST00000537162 NFXL1Q6ZNB6 911 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 RALYLQ86SE5 291 aaKnown RBP10.38□□□□□ -0.75
CPSF7-217ENST00000537162 C12orf40Q86WS4 652 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 TEX2Q8IWB9 1127 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 DHX40Q8IX18 779 aaKnown RBP10.38□□□□□ -0.75
CPSF7-217ENST00000537162 FANCBQ8NB91 859 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.38□□□□□ -0.75
CPSF7-217ENST00000537162 NCOA7Q8NI08 942 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 GIPC2Q8TF65 315 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 DNASE2BQ8WZ79 361 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 ZMAT2Q96NC0 199 aaKnown RBP10.38□□□□□ -0.75
CPSF7-217ENST00000537162 SLC22A12Q96S37 553 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 CYP2S1Q96SQ9 504 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 SLC4A5Q9BY07 1137 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 KIF9Q9HAQ2 790 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 LRRC4CQ9HCJ2 640 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 FTSJ1Q9UET6 329 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 HCN2Q9UL51 889 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 SNX11Q9Y5W9 270 aa10.38□□□□□ -0.75
CPSF7-217ENST00000537162 V9GY48 417 aaPredicted RBP10.38□□□□□ -0.75
CPSF7-217ENST00000537162 MYO18AQ92614 2054 aaKnown RBP10.38□□□□□ -0.75
CPSF7-217ENST00000537162 TP53BP1Q12888 1972 aaPredicted RBP10.37□□□□□ -0.75
CPSF7-217ENST00000537162 SPENQ96T58 3664 aaKnown RBP10.37□□□□□ -0.75
CPSF7-217ENST00000537162 A0A1W2PQF6 199 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 NDUFS2O75306 463 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 RFPL3O75679 317 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 LARGE1O95461 756 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 ARL2P36404 184 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 QARSP47897 775 aaKnown RBP10.37□□□□□ -0.75
CPSF7-217ENST00000537162 CSNK1EP49674 416 aaKnown RBP10.37□□□□□ -0.75
CPSF7-217ENST00000537162 NLRP12P59046 1061 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 USP4Q13107 963 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 GPR17Q13304 367 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 TFDP1Q14186 410 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 KIF19Q2TAC6 998 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 ZC2HC1CQ53FD0 456 aaPredicted RBP10.37□□□□□ -0.75
CPSF7-217ENST00000537162 WDR45BQ5MNZ6 344 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 FAM26EQ8N5C1 309 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 KCNE4Q8WWG9 221 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 C18orf25Q96B23 403 aaPredicted RBP10.37□□□□□ -0.75
CPSF7-217ENST00000537162 YTHDC1Q96MU7 727 aaKnown RBP10.37□□□□□ -0.75
CPSF7-217ENST00000537162 NFKBIZQ9BYH8 718 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 CD248Q9HCU0 757 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 NUB1Q9Y5A7 615 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 MYOFQ9NZM1 2061 aa10.37□□□□□ -0.75
CPSF7-217ENST00000537162 ZFHX3Q15911 3703 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 MEI4A8MW99 385 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 BTBD18B2RXH4 712 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 SH2B2O14492 632 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-217ENST00000537162 ENC1O14682 589 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 BCAT2O15382 392 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-217ENST00000537162 KAT7O95251 611 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 ITGB2P05107 769 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 MCM4P33991 863 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 ACADVLP49748 655 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 KDSRQ06136 332 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 ZNF268Q14587 947 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-217ENST00000537162 SUZ12Q15022 739 aaKnown RBP10.36□□□□□ -0.75
CPSF7-217ENST00000537162 KRTAP21-3Q3LHN1 58 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 XKR9Q5GH70 373 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 IL27RAQ6UWB1 636 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 LAYNQ6UX15 382 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 ITIH5Q86UX2 942 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 MIB1Q86YT6 1006 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 C1orf216Q8TAB5 229 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 GCNAQ96QF7 691 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 PCDHB8Q9UN66 801 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 PCDHB1Q9Y5F3 818 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 PCDHGA1Q9Y5H4 931 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 DNHD1Q96M86 4753 aa10.36□□□□□ -0.75
CPSF7-217ENST00000537162 CCDC69A6NI79 296 aa10.35□□□□□ -0.75
CPSF7-217ENST00000537162 H0Y8X5 98 aa10.35□□□□□ -0.75
CPSF7-217ENST00000537162 N4BP3O15049 544 aa10.35□□□□□ -0.75
CPSF7-217ENST00000537162 TADA3O75528 432 aa10.35□□□□□ -0.75
CPSF7-217ENST00000537162 HMGA1P17096 107 aaKnown RBP10.35□□□□□ -0.75
CPSF7-217ENST00000537162 ELAVL4P26378 380 aaKnown RBP10.35□□□□□ -0.75
CPSF7-217ENST00000537162 YWHABP31946 246 aaKnown RBP10.35□□□□□ -0.75
CPSF7-217ENST00000537162 TNFSF9P41273 254 aa10.35□□□□□ -0.75
CPSF7-217ENST00000537162 PTH1RQ03431 593 aa10.35□□□□□ -0.75
CPSF7-217ENST00000537162 NR1H3Q13133 447 aa10.35□□□□□ -0.75
CPSF7-217ENST00000537162 HSF5Q4G112 596 aaPredicted RBP10.35□□□□□ -0.75
CPSF7-217ENST00000537162 KCNT1Q5JUK3 1230 aa10.35□□□□□ -0.75
CPSF7-217ENST00000537162 MON1AQ86VX9 555 aa10.35□□□□□ -0.75
CPSF7-217ENST00000537162 EXOC8Q8IYI6 725 aa10.35□□□□□ -0.75
CPSF7-217ENST00000537162 REXO1Q8N1G1 1221 aaKnown RBP10.35□□□□□ -0.75
CPSF7-217ENST00000537162 CEP120Q8N960 986 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms