RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 SCYL3Q8IZE3 742 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.11□□□□□ -1.43
CHD4-206ENST00000536999 FBXL13Q8NEE6 735 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 EPS8L1Q8TE68 723 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 PYROXD1Q8WU10 500 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 SCG3Q8WXD2 468 aaKnown RBP6.11□□□□□ -1.43
CHD4-206ENST00000536999 NCSTNQ92542 709 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 GATA6Q92908 595 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 KCNN1Q92952 543 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 NKD2Q969F2 451 aaPredicted RBP6.11□□□□□ -1.43
CHD4-206ENST00000536999 HAUS1Q96CS2 278 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 DGCR14Q96DF8 476 aaKnown RBP6.11□□□□□ -1.43
CHD4-206ENST00000536999 NLRP4Q96MN2 994 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 C7orf26Q96N11 449 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 ASB2Q96Q27 587 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 GMLQ99445 158 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 SERPINI1Q99574 410 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 LBHD1Q9BQE6 289 aaPredicted RBP6.11□□□□□ -1.43
CHD4-206ENST00000536999 SENP7Q9BQF6 1050 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 NUDT12Q9BQG2 462 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 FERMT1Q9BQL6 677 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 TSSK1BQ9BXA7 367 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 ASCC2Q9H1I8 757 aaPredicted RBP6.11□□□□□ -1.43
CHD4-206ENST00000536999 DEFB129Q9H1M3 183 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 MYLK2Q9H1R3 596 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 CD209Q9NNX6 404 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 C1orf112Q9NSG2 853 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 TBC1D22BQ9NU19 505 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 TMOD4Q9NZQ9 345 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 ZNF180Q9UJW8 692 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 ANAPC7Q9UJX3 599 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 STRIP2Q9ULQ0 834 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 ZNF148Q9UQR1 794 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 APOBEC2Q9Y235 224 aaKnown RBP6.11□□□□□ -1.43
CHD4-206ENST00000536999 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.11□□□□□ -1.43
CHD4-206ENST00000536999 ZSWIM8A7E2V4 1837 aa6.11□□□□□ -1.43
CHD4-206ENST00000536999 ADGRA2Q96PE1 1338 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 SCN9AQ15858 1988 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 CFAP69A5D8W1 941 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 CLIC2O15247 247 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 AP1G1O43747 822 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 ADCY3O60266 1144 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 KRT38O76015 456 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 TMCC1O94876 653 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 INHAP05111 366 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 INHBAP08476 426 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 LINGO3P0C6S8 592 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 PABPC4LP0CB38 370 aaKnown RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 PIM1P11309 404 aaPredicted RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 IMPDH2P12268 514 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 CCDC130P13994 396 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 GARTP22102 1010 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 IVDP26440 423 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 ADSLP30566 484 aaPredicted RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 ACADVLP49748 655 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 CDK7P50613 346 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 RTP1P59025 263 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 NOP14P78316 857 aaKnown RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 MRPS5P82675 430 aaKnown RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 GTF2BQ00403 316 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 PRKCZQ05513 592 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 ILF2Q12905 390 aaKnown RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 ZNF211Q13398 564 aaPredicted RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 CYLC2Q14093 348 aaPredicted RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 RCN2Q14257 317 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 LRRC14Q15048 493 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 TMED2Q15363 201 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 SIX1Q15475 284 aaPredicted RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 SURF1Q15526 300 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 ECM1Q16610 540 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 HIF1AQ16665 826 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 SLC35G1Q2M3R5 365 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 CEP55Q53EZ4 464 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 TAF1BQ53T94 588 aaPredicted RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 BRDTQ58F21 947 aaPredicted RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 FSCBQ5H9T9 825 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 METTL21CQ5VZV1 264 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 SLFN13Q68D06 897 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 TTC27Q6P3X3 843 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 POTEGQ6S5H5 508 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 ACAD11Q709F0 780 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 CYS1Q717R9 158 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 ANO5Q75V66 913 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 SETD3Q86TU7 594 aaPredicted RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 FAM160B2Q86V87 743 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 CRLF3Q8IUI8 442 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 CCNJLQ8IV13 435 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 TPH2Q8IWU9 490 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 THNSL1Q8IYQ7 743 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 PPM1KQ8N3J5 372 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 TTC39CQ8N584 583 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 TERB1Q8NA31 727 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 LMO3Q8TAP4 145 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 GDAP1Q8TB36 358 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 C10orf82Q8WW14 230 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 SPIRE2Q8WWL2 714 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 STON2Q8WXE9 905 aa6.1□□□□□ -1.43
CHD4-206ENST00000536999 PSPC1Q8WXF1 523 aaKnown RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 CELF1Q92879 486 aaKnown RBP6.1□□□□□ -1.43
CHD4-206ENST00000536999 SLC5A5Q92911 643 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms