RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 SP100P23497 879 aaPredicted RBP22.58■■□□□ 1.2
TRIM3-214ENST00000536344 GTF2H1P32780 548 aa22.58■■□□□ 1.2
TRIM3-214ENST00000536344 MYL6P60660 151 aa22.58■■□□□ 1.2
TRIM3-214ENST00000536344 FOXB2Q5VYV0 432 aa22.58■■□□□ 1.2
TRIM3-214ENST00000536344 ZPBP2Q6X784 338 aa22.58■■□□□ 1.2
TRIM3-214ENST00000536344 CGRRF1Q99675 332 aa22.58■■□□□ 1.2
TRIM3-214ENST00000536344 WDR35Q9P2L0 1181 aa22.58■■□□□ 1.2
TRIM3-214ENST00000536344 PRKAG3Q9UGI9 489 aa22.58■■□□□ 1.2
TRIM3-214ENST00000536344 ENTPD5O75356 428 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 RANBP1P43487 201 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 NOP14P78316 857 aaKnown RBP22.57■■□□□ 1.2
TRIM3-214ENST00000536344 GRIK4Q16099 956 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 FAM47EQ6ZV65 393 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 PCMTD2Q9NV79 361 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 HAO1Q9UJM8 370 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 ACKR2O00590 384 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 OGTO15294 1046 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 PMM2O15305 246 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 RIPK2O43353 540 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 UNC5CO95185 931 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 KRT19P08727 400 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 ATP6V1C1P21283 382 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 PEX5P50542 639 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 SESN3P58005 492 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 TFDP1Q14186 410 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 MARCH8Q5T0T0 291 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 MTHFD1LQ6UB35 978 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 CDT1Q9H211 546 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 PCDHB4Q9Y5E5 795 aa22.57■■□□□ 1.2
TRIM3-214ENST00000536344 CCNB1P14635 433 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 PTDSS1P48651 473 aaKnown RBP22.56■■□□□ 1.2
TRIM3-214ENST00000536344 CLDN10P78369 228 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 BRSK2Q8IWQ3 736 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 GBP7Q8N8V2 638 aaPredicted RBP22.56■■□□□ 1.2
TRIM3-214ENST00000536344 FAM13CQ8NE31 585 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 RFFLQ8WZ73 363 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 ARHGEF2Q92974 986 aaKnown RBP22.56■■□□□ 1.2
TRIM3-214ENST00000536344 NUDCD1Q96RS6 583 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 FZD8Q9H461 694 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 SIP14410 1827 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 DDX3YO15523 660 aaKnown RBP22.56■■□□□ 1.2
TRIM3-214ENST00000536344 TMEM253P0C7T8 217 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 ZNF200P98182 395 aaPredicted RBP22.56■■□□□ 1.2
TRIM3-214ENST00000536344 PDCD2Q16342 344 aaPredicted RBP22.56■■□□□ 1.2
TRIM3-214ENST00000536344 TNFAIP8L3Q5GJ75 292 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 MPZL3Q6UWV2 235 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 FBF1Q8TES7 1133 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 STK32AQ8WU08 396 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 LMCD1Q9NZU5 365 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 AMFRQ9UKV5 643 aa22.56■■□□□ 1.2
TRIM3-214ENST00000536344 RBM47A0AV96 593 aaKnown RBP22.55■■□□□ 1.2
TRIM3-214ENST00000536344 ANKRD62A6NC57 917 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 WEE2P0C1S8 567 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 ORC1Q13415 861 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 RGMBQ6NW40 437 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 LMNTD2Q8IXW0 634 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 ZDHHC14Q8IZN3 488 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 DDX1Q92499 740 aaKnown RBP22.55■■□□□ 1.2
TRIM3-214ENST00000536344 ALG3Q92685 438 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 MYLK2Q9H1R3 596 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 CDHR5Q9HBB8 845 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 TRIP12Q14669 1992 aaPredicted RBP22.55■■□□□ 1.2
TRIM3-214ENST00000536344 NPTXRO95502 500 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 ACSL3O95573 720 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 CTGFP29279 349 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 GBP1P32455 592 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 MAP2K5Q13163 448 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 MESDQ14696 234 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 ZNF484Q5JVG2 852 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 TRIM7Q9C029 511 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 C2orf40Q9H1Z8 148 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 CXCL16Q9H2A7 254 aa22.55■■□□□ 1.2
TRIM3-214ENST00000536344 CPSF3Q9UKF6 684 aaKnown RBP22.55■■□□□ 1.2
TRIM3-214ENST00000536344 ABT1Q9ULW3 272 aaKnown RBP22.55■■□□□ 1.2
TRIM3-214ENST00000536344 SLC15A5A6NIM6 579 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 ABCD1P33897 745 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 MRPS35P82673 323 aaKnown RBP22.54■■□□□ 1.2
TRIM3-214ENST00000536344 MCL1Q07820 350 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 CUL2Q13617 745 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 DGKDQ16760 1214 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 DAB2IPQ5VWQ8 1189 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 ZNF467Q7Z7K2 595 aaPredicted RBP22.54■■□□□ 1.2
TRIM3-214ENST00000536344 TGS1Q96RS0 853 aaKnown RBP22.54■■□□□ 1.2
TRIM3-214ENST00000536344 ARHGAP39Q9C0H5 1083 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 DNAJC17Q9NVM6 304 aaKnown RBP22.54■■□□□ 1.2
TRIM3-214ENST00000536344 NXF1Q9UBU9 619 aaKnown RBP22.54■■□□□ 1.2
TRIM3-214ENST00000536344 PTPN22Q9Y2R2 807 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 ARF4P18085 180 aaPredicted RBP22.54■■□□□ 1.2
TRIM3-214ENST00000536344 ALDH3A1P30838 453 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 CDR2Q01850 454 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 CRHR2Q13324 411 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 HIC1Q14526 733 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 SPDYCQ5MJ68 293 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 TTC27Q6P3X3 843 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 TSHZ1Q6ZSZ6 1077 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 KIAA0319LQ8IZA0 1049 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 ZNF653Q96CK0 615 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 GORASP1Q9BQQ3 440 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 OCEL1Q9H607 264 aa22.54■■□□□ 1.2
TRIM3-214ENST00000536344 PTPRHQ9HD43 1115 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms