RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 FAM213AQ9BRX8 229 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TMEM206Q9H813 350 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 UPF2Q9HAU5 1272 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ABCB6Q9NP58 842 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 RBAKQ9NYW8 714 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SEL1LQ9UBV2 794 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 AGAP1Q9UPQ3 857 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 STYXL1Q9Y6J8 313 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 GCNT3O95395 438 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 HMGA1P17096 107 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 GAP43P17677 238 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 PCSK1P29120 753 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 HOXC13P31276 330 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 GJA4P35212 333 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 DDIT3P35638 169 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 GALK1P51570 392 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 DGKEP52429 567 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 CREB5Q02930 508 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 DDR2Q16832 855 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 INTS6LQ5JSJ4 861 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TMEM150AQ86TG1 271 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 C11orf74Q86VG3 221 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 PDCL2Q8N4E4 241 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 LRRC52Q8N7C0 313 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TSTD1Q8NFU3 115 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 CHFRQ96EP1 664 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SAAL1Q96ER3 474 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TRMT2BQ96GJ1 504 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 FIZ1Q96SL8 496 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 EDEM2Q9BV94 578 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ECT2Q9H8V3 914 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TMLHEQ9NVH6 421 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 STK17AQ9UEE5 414 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ITGA11Q9UKX5 1188 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 OBSL1O75147 1896 aa13.93□□□□□ -0.18
TNFRSF1A-207ENST00000535958 DENND4CQ5VZ89 1909 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 OTOL1A6NHN0 477 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 NOL4O94818 638 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 NFATC1O95644 943 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ACAT1P24752 427 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 CYP2F1P24903 491 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 LHX1P48742 406 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 MYO1EQ12965 1108 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 DMC1Q14565 340 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SF3A1Q15459 793 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 PLK5Q496M5 336 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 L1TD1Q5T7N2 865 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 N4BP2L1Q5TBK1 243 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SYT13Q7L8C5 426 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ZNF720Q7Z2F6 126 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 BRSK2Q8IWQ3 736 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ADGRF2Q8IZF7 708 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 CSGALNACT2Q8N6G5 542 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SPATA18Q8TC71 538 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 LRRC15Q8TF66 581 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ANKRD36BP1Q96IX9 119 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ZC3H10Q96K80 434 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SMOC1Q9H4F8 434 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TBC1D7Q9P0N9 293 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 L1RE1Q9UN81 338 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SNX9Q9Y5X1 595 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 WNT6Q9Y6F9 365 aa13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 KMT2BQ9UMN6 2715 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 MAP1BP46821 2468 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-207ENST00000535958 VPS37CA5D8V6 355 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 CAVIN2O95810 425 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 IDEP14735 1019 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ANXA13P27216 316 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 PMLP29590 882 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 RBP5P82980 135 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 GRIN1Q05586 938 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 USP4Q13107 963 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ALCAMQ13740 583 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ZNF77Q15935 545 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 USP39Q53GS9 565 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 PLA2G2CQ5R387 149 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 DAB2IPQ5VWQ8 1189 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 RRAGBQ5VZM2 374 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SV2BQ7L1I2 683 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TOP6BLQ8N6T0 577 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 C1orf127Q8N9H9 656 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 FUBP3Q96I24 572 aaKnown RBP eCLIP13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 RXFP3Q9NSD7 469 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 EHD2Q9NZN4 543 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 GTF3C4Q9UKN8 822 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 CHD8Q9HCK8 2581 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SDK1Q7Z5N4 2213 aa13.91□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TADA3O75528 432 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 KCNK5O95279 499 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TNNC2P02585 160 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 GARTP22102 1010 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ADSSP30520 456 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 CFAP221Q4G0U5 840 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TCEAL6Q6IPX3 200 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 PSAPL1Q6NUJ1 521 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 CRELD2Q6UXH1 353 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TTC30AQ86WT1 665 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ARL14EPQ8N8R7 260 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms