RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 LRRD1A4D1F6 860 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 LRCH4O75427 683 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 ACSL3O95573 720 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 DRD4P21917 467 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 IL1R2P27930 398 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 CDKN2BP42772 138 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 KYAT1Q16773 422 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 FAM110CQ1W6H9 321 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 SMTNL2Q2TAL5 461 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 TFDP3Q5H9I0 405 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 GSTA5Q7RTV2 222 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 CPLX4Q7Z7G2 160 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 CNPY4Q8N129 248 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 CCDC89Q8N998 374 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 CHMP6Q96FZ7 201 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 HEXIM2Q96MH2 286 aaKnown RBP14.09□□□□□ -0.15
VPS33B-202ENST00000535906 ADPGKQ9BRR6 497 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 ROPN1BQ9BZX4 212 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-202ENST00000535906 ROPN1Q9HAT0 212 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-202ENST00000535906 CYP3A43Q9HB55 503 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 C2CD2Q9Y426 696 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 C3orf70A6NLC5 250 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-202ENST00000535906 M0QYV0 167 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 RASGRF2O14827 1237 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 HOXA11P31270 313 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-202ENST00000535906 GPD2P43304 727 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 COPS2P61201 443 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 SLC25A11Q02978 314 aaKnown RBP14.09□□□□□ -0.15
VPS33B-202ENST00000535906 KCNT1Q5JUK3 1230 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 PRAMEF19Q5SWL8 479 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 GKAP1Q5VSY0 366 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-202ENST00000535906 SPRYD7Q5W111 196 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 IQSEC1Q6DN90 963 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 MFSD5Q6N075 450 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 DPH6Q7L8W6 267 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 ZNF410Q86VK4 478 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 CACNA2D3Q8IZS8 1091 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 ATXN2LQ8WWM7 1075 aaKnown RBP14.09□□□□□ -0.15
VPS33B-202ENST00000535906 KIF12Q96FN5 646 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 CABS1Q96KC9 395 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 SELENOSQ9BQE4 189 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 SYNCQ9H7C4 482 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 CDHR5Q9HBB8 845 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 METTL5Q9NRN9 209 aaKnown RBP14.09□□□□□ -0.15
VPS33B-202ENST00000535906 DDX56Q9NY93 547 aaKnown RBP14.09□□□□□ -0.15
VPS33B-202ENST00000535906 ITGA11Q9UKX5 1188 aa14.09□□□□□ -0.15
VPS33B-202ENST00000535906 P4HA1P13674 534 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 NDST1P52848 882 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 GSCP56915 257 aaPredicted RBP14.08□□□□□ -0.16
VPS33B-202ENST00000535906 RBP5P82980 135 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 CAV1Q03135 178 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 AUHQ13825 339 aaKnown RBP14.08□□□□□ -0.16
VPS33B-202ENST00000535906 CNGA2Q16280 664 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 CCDC121Q6ZUS5 278 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 UBA3Q8TBC4 463 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 HAUS1Q96CS2 278 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 PARK7Q99497 189 aaKnown RBP14.08□□□□□ -0.16
VPS33B-202ENST00000535906 FAM49AQ9H0Q0 323 aaPredicted RBP14.08□□□□□ -0.16
VPS33B-202ENST00000535906 ADAMTS10Q9H324 1103 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 ZWILCHQ9H900 591 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 BARX2Q9UMQ3 279 aaPredicted RBP14.08□□□□□ -0.16
VPS33B-202ENST00000535906 ZNF148Q9UQR1 794 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 DOCK3Q8IZD9 2030 aa14.08□□□□□ -0.16
VPS33B-202ENST00000535906 DYNC1LI2O43237 492 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-202ENST00000535906 ZSCAN5DPP0CG00 497 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 VDRP11473 427 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 CYP3A5P20815 502 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 PTPN7P35236 360 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 GRM5P41594 1212 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 PSMC4P43686 418 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 ACTN3Q08043 901 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-202ENST00000535906 INCA1Q0VD86 236 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 ZNF268Q14587 947 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-202ENST00000535906 KYNUQ16719 465 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 P3H1Q32P28 736 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 IZUMO3Q5VZ72 239 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 FBXW10Q5XX13 1052 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 DRICH1Q6PGQ1 229 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-202ENST00000535906 POLNQ7Z5Q5 900 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 FNIP1Q8TF40 1166 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 ZNF317Q96PQ6 595 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-202ENST00000535906 SCN1AP35498 2009 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 DNAH12Q6ZR08 3092 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 H0YHG0 523 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 GPR32O75388 356 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 NPTXRO95502 500 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 TTC4O95801 387 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 HMGCRP04035 888 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 ETS1P14921 441 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 GABRB2P47870 512 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 LMNB2Q03252 620 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 LONRF1Q17RB8 773 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 TAOK1Q7L7X3 1001 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 C12orf29Q8N999 325 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 ZMAT2Q96NC0 199 aaKnown RBP14.07□□□□□ -0.16
VPS33B-202ENST00000535906 SNTG2Q9NY99 539 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 WDR35Q9P2L0 1181 aa14.07□□□□□ -0.16
VPS33B-202ENST00000535906 SAE1Q9UBE0 346 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-202ENST00000535906 FKBP1BP68106 108 aa14.06□□□□□ -0.16
VPS33B-202ENST00000535906 OASLQ15646 514 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms