RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 KCMF1Q9P0J7 381 aa5.47□□□□□ -1.53
ECHDC1-223ENST00000534442 CD207Q9UJ71 328 aa5.47□□□□□ -1.53
ECHDC1-223ENST00000534442 ZFP69BQ9UJL9 534 aa5.47□□□□□ -1.53
ECHDC1-223ENST00000534442 PCDHA5Q9Y5H7 936 aa5.47□□□□□ -1.53
ECHDC1-223ENST00000534442 UMODL1Q5DID0 1318 aa5.47□□□□□ -1.53
ECHDC1-223ENST00000534442 MYOCOSA0A1B0GUC4 107 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 ZNF503-AS2A6NEH8 195 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 CXCL11O14625 94 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 APAF1O14727 1248 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 TBX10O75333 385 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 PAPLNO95428 1278 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 GP1BBP13224 206 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 CYBAP13498 195 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 MCAMP43121 646 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 CDR1P51861 262 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 ITGA1P56199 1179 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 PPP3CAQ08209 521 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 FAM47AQ5JRC9 791 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 ARTNQ5T4W7 220 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 OLFML2BQ68BL8 750 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 B3GNT8Q7Z7M8 397 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 CERS3Q8IU89 383 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 ZNF34Q8IZ26 560 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 BCL6BQ8N143 479 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 STPG3Q8N7X2 389 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 OR5AN1Q8NGI8 311 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 MAP4K1Q92918 833 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 LIN37Q96GY3 246 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 KCNK12Q9HB15 430 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 DMRT3Q9NQL9 472 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 MAN1C1Q9NR34 630 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 KCND1Q9NSA2 647 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 MAGEL2Q9UJ55 1249 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 SMG5Q9UPR3 1016 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 LRRK2Q5S007 2527 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 SIP14410 1827 aa5.46□□□□□ -1.54
ECHDC1-223ENST00000534442 LOC102724159A0A0B4J2E5 919 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 ERVV-1B6SEH8 477 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 N4BP3O15049 544 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 CUTAO60888 179 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 SEC24DO94855 1032 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 IGFBP6P24592 240 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 GCLCP48506 637 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 SLC16A1P53985 500 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 CCL23P55773 120 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 PWP2Q15269 919 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 TARBP2Q15633 366 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 C3orf36Q3SXR2 165 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 COBLL1Q53SF7 1204 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 CCDC178Q5BJE1 867 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 TTLL5Q6EMB2 1281 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 BTNL9Q6UXG8 535 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 UBALD2Q8IYN6 164 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 SAMD3Q8N6K7 520 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 OR2I1PQ8NGU4 316 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 PPP1R14CQ8TAE6 165 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 C1GALT1C1Q96EU7 318 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 HIST1H2AHQ96KK5 128 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 ZSWIM3Q96MP5 696 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 NOX5Q96PH1 765 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 FAM193BQ96PV7 902 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 TGS1Q96RS0 853 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 HIST1H2AJQ99878 128 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 UTP14AQ9BVJ6 771 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 SCNM1Q9BWG6 230 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 STARD7Q9NQZ5 370 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 ZNF70Q9UC06 446 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 CTNNA3Q9UI47 895 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 MBD1Q9UIS9 605 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 MAST3O60307 1309 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 MAP3K15Q6ZN16 1313 aa5.45□□□□□ -1.54
ECHDC1-223ENST00000534442 NBEAL1Q6ZS30 2694 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 ITPR2Q14571 2701 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 ANO9A1A5B4 782 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 H3BML4 177 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 MAFGO15525 162 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 UTP20O75691 2785 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 TUSC2O75896 110 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 KCNK5O95279 499 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 GSPT1P15170 499 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 ITGB5P18084 799 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 RHCEP18577 417 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 NEK3P51956 506 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 RBM5P52756 815 aaKnown RBP eCLIP5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 RHDQ02161 417 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 PGS1Q32NB8 556 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 MUM1L1Q5H9M0 696 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 CXXC5Q7LFL8 322 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 IGDCC3Q8IVU1 814 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 NGEFQ8N5V2 710 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 GLB1L3Q8NCI6 653 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 WDR48Q8TAF3 677 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 TTC17Q96AE7 1141 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 MPHOSPH6Q99547 160 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 RTP3Q9BQQ7 232 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 C11orf84Q9BUA3 381 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 PHF7Q9BWX1 381 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 NSUN3Q9H649 340 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 GREM2Q9H772 168 aa5.44□□□□□ -1.54
ECHDC1-223ENST00000534442 SIRT5Q9NXA8 310 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms