RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 FBXL20Q96IG2 436 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 TRIB1Q96RU8 372 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 DMRTA2Q96SC8 542 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 NUP88Q99567 741 aaPredicted RBP4.96□□□□□ -1.62
ITGB1-219ENST00000534049 SMAD5Q99717 465 aaKnown RBP4.96□□□□□ -1.62
ITGB1-219ENST00000534049 R3HDMLQ9H3Y0 253 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 RSAD1Q9HA92 442 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 ALG13Q9NP73 1137 aaKnown RBP4.96□□□□□ -1.62
ITGB1-219ENST00000534049 KMT5AQ9NQR1 393 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 ADARB2Q9NS39 739 aaKnown RBP4.96□□□□□ -1.62
ITGB1-219ENST00000534049 SEMA4GQ9NTN9 838 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 DONSONQ9NYP3 566 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 SERPINB13Q9UIV8 391 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 CAMSAP1Q5T5Y3 1602 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 PTPRTO14522 1441 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 KIF16BQ96L93 1317 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 ZNF644Q9H582 1327 aaPredicted RBP4.96□□□□□ -1.62
ITGB1-219ENST00000534049 PZPP20742 1482 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 NT5C1B-RDH14C9J2C7 533 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 F2RL2O00254 374 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 TRIAP1O43715 76 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 SUN1O94901 812 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 GNAI2P04899 355 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 MCM5P33992 734 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 TNNT3P45378 269 aaPredicted RBP4.95□□□□□ -1.62
ITGB1-219ENST00000534049 PIK3CGP48736 1102 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 C21orf58P58505 322 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 DSC2Q02487 901 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 NHLH1Q02575 133 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 PTPROQ16827 1216 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 FLYWCH1Q4VC44 716 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 KAZNQ674X7 775 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 ZBTB46Q86UZ6 589 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 FAM98AQ8NCA5 519 aaKnown RBP4.95□□□□□ -1.62
ITGB1-219ENST00000534049 B3GALNT2Q8NCR0 500 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 TMIEQ8NEW7 156 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 RGMAQ96B86 450 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 UROC1Q96N76 676 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 OSBPL9Q96SU4 736 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 VRK1Q99986 396 aaPredicted RBP4.95□□□□□ -1.62
ITGB1-219ENST00000534049 LRFN3Q9BTN0 628 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 ALG8Q9BVK2 526 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 KRTAP9-8Q9BYQ0 159 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 GPR35Q9HC97 309 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 MED4Q9NPJ6 270 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 TYW1Q9NV66 732 aaKnown RBP4.95□□□□□ -1.62
ITGB1-219ENST00000534049 CGNQ9P2M7 1197 aaKnown RBP4.95□□□□□ -1.62
ITGB1-219ENST00000534049 ENTPD2Q9Y5L3 495 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 ABCC3O15438 1527 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 PRDM15P57071 1507 aaPredicted RBP4.95□□□□□ -1.62
ITGB1-219ENST00000534049 MAP3K1Q13233 1512 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 RTEL1-TNFRSF6BF6WH68 1400 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 CROCC2H7BZ55 1655 aa4.95□□□□□ -1.62
ITGB1-219ENST00000534049 SPAG9O60271 1321 aaKnown RBP4.95□□□□□ -1.62
ITGB1-219ENST00000534049 SHANK2Q9UPX8 1470 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 EIF2AK4Q9P2K8 1649 aaKnown RBP4.94□□□□□ -1.62
ITGB1-219ENST00000534049 ZC3H13Q5T200 1668 aaKnown RBP4.94□□□□□ -1.62
ITGB1-219ENST00000534049 GCOM1H8Y6P7 765 aaPredicted RBP4.94□□□□□ -1.62
ITGB1-219ENST00000534049 POLRMTO00411 1230 aaKnown RBP4.94□□□□□ -1.62
ITGB1-219ENST00000534049 ZRANB2O95218 330 aaKnown RBP eCLIP4.94□□□□□ -1.62
ITGB1-219ENST00000534049 GJB1P08034 283 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 RARBP10826 455 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 WT1P19544 449 aaPredicted RBP4.94□□□□□ -1.62
ITGB1-219ENST00000534049 AKAP5P24588 427 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 PLA2G5P39877 138 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 GRIA3P42263 894 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 IL12RB1P42701 662 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 NPTX2P47972 431 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 KCNJ4P48050 445 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 HK3P52790 923 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 EXOSC10Q01780 885 aaKnown RBP4.94□□□□□ -1.62
ITGB1-219ENST00000534049 NOGQ13253 232 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 SNAPC2Q13487 334 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 MYBPC2Q14324 1141 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 BECN1Q14457 450 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 ODF1Q14990 250 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 USP45Q70EL2 814 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 TMPRSS9Q7Z410 1059 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 ZSCAN30Q86W11 494 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 SDR16C5Q8N3Y7 309 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 PDCL2Q8N4E4 241 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 NGEFQ8N5V2 710 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 POC1BQ8TC44 478 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 SNRNP27Q8WVK2 155 aaKnown RBP4.94□□□□□ -1.62
ITGB1-219ENST00000534049 TIMP4Q99727 224 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 TCF7L1Q9HCS4 588 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 ANAPC4Q9UJX5 808 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 A2ML1A8K2U0 1454 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 IQSEC2Q5JU85 1478 aa4.94□□□□□ -1.62
ITGB1-219ENST00000534049 DNMT1P26358 1616 aaKnown RBP4.94□□□□□ -1.62
ITGB1-219ENST00000534049 A0A0B4J269 797 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 CTAGE5O15320 804 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 IL33O95760 270 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 IGLV2-14P01704 120 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 PDCP20941 246 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 MSNP26038 577 aaKnown RBP4.93□□□□□ -1.62
ITGB1-219ENST00000534049 PRDX5P30044 214 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 TDO2P48775 406 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 GTF2A1P52655 376 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-219ENST00000534049 EVA1CP58658 441 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms