RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 SFI1A8K8P3 1242 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 E9PMD0 336 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 FAM189A1O60320 539 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 ZIC2O95409 532 aaPredicted RBP8.43□□□□□ -1.06
NXF1-215ENST00000533440 CSH1P0DML2 217 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 CSH2P0DML3 217 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
NXF1-215ENST00000533440 CHRM1P11229 460 aaPredicted RBP8.43□□□□□ -1.06
NXF1-215ENST00000533440 CD59P13987 128 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 TCF3P15923 654 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 OPRD1P41143 372 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 IFNAR2P48551 515 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 CDR1P51861 262 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 MRPS21P82921 87 aaKnown RBP8.43□□□□□ -1.06
NXF1-215ENST00000533440 PPP2R3AQ06190 1150 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 STRN3Q13033 797 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 NR1H3Q13133 447 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 PDIA5Q14554 519 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 ZNF174Q15697 407 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 ENOX2Q16206 610 aaKnown RBP8.43□□□□□ -1.06
NXF1-215ENST00000533440 KYAT1Q16773 422 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 GAB4Q2WGN9 574 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 MAP7D1Q3KQU3 841 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 C2orf27AQ580R0 203 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 CENPQQ7L2Z9 268 aaPredicted RBP8.43□□□□□ -1.06
NXF1-215ENST00000533440 TMEFF1Q8IYR6 380 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 HDDC3Q8N4P3 179 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 FRMD1Q8N878 549 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 C4orf32Q8N8J7 132 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 NSUN7Q8NE18 718 aaKnown RBP8.43□□□□□ -1.06
NXF1-215ENST00000533440 RLN3Q8WXF3 142 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 ADAMTS14Q8WXS8 1223 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 KCNN1Q92952 543 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 SLC22A12Q96S37 553 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 TIPINQ9BVW5 301 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 TMEM206Q9H813 350 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 CAPN10Q9HC96 672 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 LRWD1Q9UFC0 647 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 KCNG1Q9UIX4 513 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 DSEQ9UL01 958 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 SLC6A14Q9UN76 642 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 DNM3Q9UQ16 869 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 WNT6Q9Y6F9 365 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 BPTFQ12830 3046 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 APC2O95996 2303 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 ANK1P16157 1881 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 PCDH15Q96QU1 1955 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 OPHN1O60890 802 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 ALDH1A2O94788 518 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 NOL4O94818 638 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 SERPINF2P08697 491 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 USP17L7P0C7H9 530 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 PLS3P13797 630 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 ITPKAP23677 461 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 GUCY2CP25092 1073 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 GPR15P49685 360 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 SEC13P55735 322 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 DUOXA1Q1HG43 343 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 HSF5Q4G112 596 aaPredicted RBP8.42□□□□□ -1.06
NXF1-215ENST00000533440 LYSMD4Q5XG99 296 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 LMBRD2Q68DH5 695 aaPredicted RBP8.42□□□□□ -1.06
NXF1-215ENST00000533440 CCNI2Q6ZMN8 369 aaPredicted RBP8.42□□□□□ -1.06
NXF1-215ENST00000533440 ARMCX6Q7L4S7 300 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 EFCAB13Q8IY85 973 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 DCP1BQ8IZD4 617 aaKnown RBP8.42□□□□□ -1.06
NXF1-215ENST00000533440 THEM5Q8N1Q8 247 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 CCDC33Q8N5R6 958 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 IGSF22Q8N9C0 903 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 CEP76Q8TAP6 659 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 SNX29Q8TEQ0 813 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 WHAMMQ8TF30 809 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 GTF3C6Q969F1 213 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 TRMT2BQ96GJ1 504 aaKnown RBP8.42□□□□□ -1.06
NXF1-215ENST00000533440 SPACA7Q96KW9 195 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 MYRFLQ96LU7 910 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 CYP2S1Q96SQ9 504 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 CCSER1Q9C0I3 900 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 LINC00597Q9H2U6 94 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 CCDC86Q9H6F5 360 aaKnown RBP8.42□□□□□ -1.06
NXF1-215ENST00000533440 RPF1Q9H9Y2 349 aaKnown RBP8.42□□□□□ -1.06
NXF1-215ENST00000533440 SCUBE2Q9NQ36 999 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 FSCN3Q9NQT6 498 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 TMLHEQ9NVH6 421 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 DNAAF2Q9NVR5 837 aaKnown RBP8.42□□□□□ -1.06
NXF1-215ENST00000533440 CACNA2D2Q9NY47 1150 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 ABI2Q9NYB9 513 aaPredicted RBP8.42□□□□□ -1.06
NXF1-215ENST00000533440 GCNT4Q9P109 453 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 UXTQ9UBK9 157 aaPredicted RBP8.42□□□□□ -1.06
NXF1-215ENST00000533440 PCDHB5Q9Y5E4 795 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 STK24Q9Y6E0 443 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 PLXNB3Q9ULL4 1909 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 SCN1AP35498 2009 aa8.42□□□□□ -1.06
NXF1-215ENST00000533440 ADAMTS9Q9P2N4 1935 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 ATXN2Q99700 1313 aaKnown RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 A0A0A0MRY4 1105 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 TRAV19A0A0A6YYK7 116 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 SGK1O00141 431 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 ARHGAP33O14559 1287 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 CYB561D2O14569 222 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 OGTO15294 1046 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms