RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 BAG1Q99933 345 aaPredicted RBP12.05□□□□□ -0.48
GMDS-210ENST00000533279 VN1R3Q9BXE9 311 aa12.05□□□□□ -0.48
GMDS-210ENST00000533279 DPEP3Q9H4B8 488 aa12.05□□□□□ -0.48
GMDS-210ENST00000533279 TLE6Q9H808 572 aa12.05□□□□□ -0.48
GMDS-210ENST00000533279 RXFP1Q9HBX9 757 aa12.05□□□□□ -0.48
GMDS-210ENST00000533279 DMAP1Q9NPF5 467 aaPredicted RBP12.05□□□□□ -0.48
GMDS-210ENST00000533279 KRT82Q9NSB4 513 aa12.05□□□□□ -0.48
GMDS-210ENST00000533279 EHD2Q9NZN4 543 aa12.05□□□□□ -0.48
GMDS-210ENST00000533279 LMCD1Q9NZU5 365 aa12.05□□□□□ -0.48
GMDS-210ENST00000533279 AFF4Q9UHB7 1163 aaKnown RBP12.05□□□□□ -0.48
GMDS-210ENST00000533279 GTF3C4Q9UKN8 822 aa12.05□□□□□ -0.48
GMDS-210ENST00000533279 TSC2P49815 1807 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 SSU72P8A0A1W2PR75 194 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 C2orf71A6NGG8 1288 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 AP1G2O75843 785 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 ARHGEF15O94989 841 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 EFEMP2O95967 443 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 C1RP00736 705 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 LRG1P02750 347 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 CCDC130P13994 396 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 DESP17661 470 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 HNRNPH3P31942 346 aaKnown RBP12.04□□□□□ -0.48
GMDS-210ENST00000533279 CLCN1P35523 988 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 GRIK1P39086 918 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 MAGEA11P43364 429 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 NSFP46459 744 aaKnown RBP12.04□□□□□ -0.48
GMDS-210ENST00000533279 CDK17Q00537 523 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 ROR1Q01973 937 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 RAB33AQ14088 237 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 ARID5BQ14865 1188 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 MGAT5BQ3V5L5 792 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 CFAP221Q4G0U5 840 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 TAF3Q5VWG9 929 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 LCLAT1Q6UWP7 414 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 VSTM1Q6UX27 236 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 FAM35AQ86V20 835 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 SCN4BQ8IWT1 228 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 CCDC170Q8IYT3 715 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 TC2NQ8N9U0 490 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 ZNF461Q8TAF7 563 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 EPS8L1Q8TE68 723 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 WHAMMQ8TF30 809 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 ZNF606Q8WXB4 792 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 TRIM11Q96F44 468 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 PCED1BQ96HM7 432 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 TWNKQ96RR1 684 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 SEPT5Q99719 369 aaPredicted RBP12.04□□□□□ -0.48
GMDS-210ENST00000533279 HNRNPABQ99729 332 aaKnown RBP12.04□□□□□ -0.48
GMDS-210ENST00000533279 AGPAT1Q99943 283 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 ZNF518BQ9C0D4 1074 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 GPR88Q9GZN0 384 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 NSUN3Q9H649 340 aaKnown RBP12.04□□□□□ -0.48
GMDS-210ENST00000533279 HAUS4Q9H6D7 363 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 HSFX1Q9UBD0 423 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 TSPAN16Q9UKR8 245 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 PCDHGC3Q9UN70 934 aa12.04□□□□□ -0.48
GMDS-210ENST00000533279 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.04□□□□□ -0.48
GMDS-210ENST00000533279 MYBPHLA2RUH7 354 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 O00370 1275 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 FSCN2O14926 492 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 TEX28O15482 410 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 ATP2C2O75185 946 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 MICAL2O94851 1124 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 CNPP09543 421 aaKnown RBP12.03□□□□□ -0.48
GMDS-210ENST00000533279 OR4Q2P0C623 313 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 NPR3P17342 541 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 RPL17P18621 184 aaKnown RBP12.03□□□□□ -0.48
GMDS-210ENST00000533279 BDNFP23560 247 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 ACADSBP45954 432 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 ERVFC1P60507 584 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 ADCY1Q08828 1119 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 PPP1R26Q5T8A7 1209 aaPredicted RBP12.03□□□□□ -0.48
GMDS-210ENST00000533279 GPR153Q6NV75 609 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 FAM171BQ6P995 826 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 RTL10Q7L3V2 364 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 ITIH5Q86UX2 942 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 PALB2Q86YC2 1186 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 GPIHBP1Q8IV16 184 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 C12orf29Q8N999 325 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 ANKRD52Q8NB46 1076 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 PDLIM2Q96JY6 352 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 CEP295NLQ96MC4 621 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 PGLYRP2Q96PD5 576 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 KLHL5Q96PQ7 755 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 RTP3Q9BQQ7 232 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 PLEKHA4Q9H4M7 779 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 CYP4F11Q9HBI6 524 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 CRTAC1Q9NQ79 661 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 ST7Q9NRC1 585 aa12.03□□□□□ -0.48
GMDS-210ENST00000533279 MTMR11A4FU01 709 aa12.02□□□□□ -0.49
GMDS-210ENST00000533279 RNF225M0QZC1 329 aaPredicted RBP12.02□□□□□ -0.49
GMDS-210ENST00000533279 NCK2O43639 380 aa12.02□□□□□ -0.49
GMDS-210ENST00000533279 TBC1D4O60343 1298 aa12.02□□□□□ -0.49
GMDS-210ENST00000533279 XYLBO75191 536 aa12.02□□□□□ -0.49
GMDS-210ENST00000533279 SKILP12757 684 aa12.02□□□□□ -0.49
GMDS-210ENST00000533279 ATF2P15336 505 aa12.02□□□□□ -0.49
GMDS-210ENST00000533279 EIF4A3P38919 411 aaKnown RBP12.02□□□□□ -0.49
GMDS-210ENST00000533279 EPHB3P54753 998 aa12.02□□□□□ -0.49
GMDS-210ENST00000533279 GOLGA8FQ08AF8 430 aa12.02□□□□□ -0.49
GMDS-210ENST00000533279 GOLGA8DPQ0D2H9 430 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms