RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 HEXIM2Q96MH2 286 aaKnown RBP19.6■□□□□ 0.73
SMPD1-208ENST00000533123 ZSWIM1Q9BR11 485 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 GPR62Q9BZJ7 368 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 INSL6Q9Y581 213 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 GABRDO14764 452 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 BUB1BO60566 1050 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-208ENST00000533123 PRLRP16471 622 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 ACAT1P24752 427 aaKnown RBP19.6■□□□□ 0.73
SMPD1-208ENST00000533123 CLEC16AQ2KHT3 1053 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 KCNT2Q6UVM3 1135 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 DAAM2Q86T65 1068 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 UNC93AQ86WB7 457 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 TMEM86AQ8N2M4 240 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 C12orf29Q8N999 325 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 PHOSPHO2Q8TCD6 241 aa19.6■□□□□ 0.73
SMPD1-208ENST00000533123 DDX43Q9NXZ2 648 aaKnown RBP19.6■□□□□ 0.73
SMPD1-208ENST00000533123 TRAPPC3O43617 180 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 PAEPP09466 180 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 TCP1P17987 556 aaKnown RBP19.59■□□□□ 0.73
SMPD1-208ENST00000533123 SHHQ15465 462 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 RASIP1Q5U651 963 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 LPIN3Q9BQK8 851 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 TLL1O43897 1013 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 CYP11A1P05108 521 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 TKTP29401 623 aaKnown RBP19.59■□□□□ 0.73
SMPD1-208ENST00000533123 GPC5P78333 572 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 SLFN11Q7Z7L1 901 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 PASD1Q8IV76 773 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 MS4A14Q96JA4 679 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 B3GALT6Q96L58 329 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 RAD9AQ99638 391 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 PCDHB8Q9UN66 801 aa19.59■□□□□ 0.73
SMPD1-208ENST00000533123 FAM163BP0C2L3 166 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 UNGP13051 313 aaPredicted RBP19.58■□□□□ 0.73
SMPD1-208ENST00000533123 LHX1P48742 406 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 CDR1P51861 262 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 CKAP4Q07065 602 aaKnown RBP19.58■□□□□ 0.73
SMPD1-208ENST00000533123 FAM171A1Q5VUB5 890 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 ACAD10Q6JQN1 1059 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 FUT10Q6P4F1 479 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 FBXO38Q6PIJ6 1188 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 METTL23Q86XA0 190 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 CEP57Q86XR8 500 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 CPA5Q8WXQ8 436 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 RNPC3Q96LT9 517 aaKnown RBP19.58■□□□□ 0.73
SMPD1-208ENST00000533123 ZNF558Q96NG5 402 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 CTTNBP2NLQ9P2B4 639 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 DSEQ9UL01 958 aa19.58■□□□□ 0.73
SMPD1-208ENST00000533123 SF3B1O75533 1304 aaKnown RBP eCLIP19.58■□□□□ 0.72
SMPD1-208ENST00000533123 LCHNA4D1U4 455 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 ATP2C2O75185 946 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 PSMC1P62191 440 aaKnown RBP19.57■□□□□ 0.72
SMPD1-208ENST00000533123 OVOS1Q6IE37 1185 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 FIBCD1Q8N539 461 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 IGSF21Q96ID5 467 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 RABGGTBP53611 331 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 YWHAHQ04917 246 aaPredicted RBP19.57■□□□□ 0.72
SMPD1-208ENST00000533123 CCDC142Q17RM4 750 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 KIAA0319Q5VV43 1072 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 NAA35Q5VZE5 725 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 TAS1R1Q7RTX1 841 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 PEX26Q7Z412 305 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 NT5DC3Q86UY8 548 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 ZNF677Q86XU0 584 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 COLGALT1Q8NBJ5 622 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 ZNF653Q96CK0 615 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 CYFIP2Q96F07 1278 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 RTP3Q9BQQ7 232 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 FAM49BQ9NUQ9 324 aa19.57■□□□□ 0.72
SMPD1-208ENST00000533123 GRXCR1A8MXD5 290 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 VDRP11473 427 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 LAG3P18627 525 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 TYMPP19971 482 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 C2orf54Q08AI8 447 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 RPS6KA1Q15418 735 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 C2CD6Q53TS8 623 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 SMYD5Q6GMV2 418 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 FAM109BQ6ICB4 259 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-208ENST00000533123 RHOT2Q8IXI1 618 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 CRYBG2Q8N1P7 616 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 VWA8A3KMH1 1905 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 CHD7Q9P2D1 2997 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 ARHGEF37A1IGU5 675 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 H0YGN5 161 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 CYP1A1P04798 512 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-208ENST00000533123 RHOXF2BP0C7M4 288 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 SGO2Q562F6 1265 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 SYCE1Q8N0S2 351 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 SLC39A11Q8N1S5 342 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 B3GALNT2Q8NCR0 500 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 TNIP3Q96KP6 325 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 RHOXF2Q9BQY4 288 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 ANKZF1Q9H8Y5 726 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 TSC2P49815 1807 aa19.56■□□□□ 0.72
SMPD1-208ENST00000533123 PDE4DIPQ5VU43 2346 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 LINC00271P0C7V0 271 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 PPP1R26Q5T8A7 1209 aaPredicted RBP19.55■□□□□ 0.72
SMPD1-208ENST00000533123 GPR161Q8N6U8 529 aaKnown RBP19.55■□□□□ 0.72
SMPD1-208ENST00000533123 NUP85Q9BW27 656 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 VN1R3Q9BXE9 311 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms