RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 MYLPFQ96A32 169 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 CEP295NLQ96MC4 621 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 MRPL45Q9BRJ2 306 aaKnown RBP17.79■□□□□ 0.44
PKP3-209ENST00000533069 CRTAC1Q9NQ79 661 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 UXTQ9UBK9 157 aaPredicted RBP17.79■□□□□ 0.44
PKP3-209ENST00000533069 NXF1Q9UBU9 619 aaKnown RBP17.79■□□□□ 0.44
PKP3-209ENST00000533069 MYO10Q9HD67 2058 aa17.79■□□□□ 0.44
PKP3-209ENST00000533069 SOBPA7XYQ1 873 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 HCRTO43612 131 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 AKAP3O75969 853 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 CLSTN1O94985 981 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 KRT13P13646 458 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 P4HA1P13674 534 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 HMGA1P17096 107 aaKnown RBP17.78■□□□□ 0.44
PKP3-209ENST00000533069 DDX6P26196 483 aaKnown RBP eCLIP17.78■□□□□ 0.44
PKP3-209ENST00000533069 PSMC2P35998 433 aaKnown RBP17.78■□□□□ 0.44
PKP3-209ENST00000533069 VIPR2P41587 438 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 VAMP7P51809 220 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 TCF15Q12870 199 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 ADAM9Q13443 819 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 GRM2Q14416 872 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 SGSM1Q2NKQ1 1148 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 SLC44A4Q53GD3 710 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 STXBP5Q5T5C0 1151 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 ZNF658Q5TYW1 1059 aaPredicted RBP17.78■□□□□ 0.44
PKP3-209ENST00000533069 CAVIN1Q6NZI2 390 aaKnown RBP17.78■□□□□ 0.44
PKP3-209ENST00000533069 VITQ6UXI7 678 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 MFSD6LQ8IWD5 586 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 CCDC105Q8IYK2 499 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 FAM186BQ8IYM0 893 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 OR6B3Q8NGW1 331 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 SMARCE1Q969G3 411 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 TRMT2BQ96GJ1 504 aaKnown RBP17.78■□□□□ 0.44
PKP3-209ENST00000533069 MKNK1Q9BUB5 465 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 DDX23Q9BUQ8 820 aaKnown RBP17.78■□□□□ 0.44
PKP3-209ENST00000533069 TASP1Q9H6P5 420 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 BRD9Q9H8M2 597 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 TRPV5Q9NQA5 729 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 OBP2AQ9NY56 170 aa17.78■□□□□ 0.44
PKP3-209ENST00000533069 MAGEC2Q9UBF1 373 aaPredicted RBP17.78■□□□□ 0.44
PKP3-209ENST00000533069 PI15O43692 258 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 ATP2C2O75185 946 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 NOL4O94818 638 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 VNN1O95497 513 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 PDGFRBP09619 1106 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 GPR15P49685 360 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 NLRP12P59046 1061 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 DDR2Q16832 855 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 CCDC142Q17RM4 750 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 SV2AQ7L0J3 742 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 ARID3BQ8IVW6 561 aaPredicted RBP17.77■□□□□ 0.44
PKP3-209ENST00000533069 SCN4BQ8IWT1 228 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 SMYD4Q8IYR2 804 aaPredicted RBP17.77■□□□□ 0.44
PKP3-209ENST00000533069 MYRFLQ96LU7 910 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 SIT1Q9Y3P8 196 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 PCDHA5Q9Y5H7 936 aa17.77■□□□□ 0.44
PKP3-209ENST00000533069 WDFY4Q6ZS81 3184 aa17.77■□□□□ 0.43
PKP3-209ENST00000533069 DOCK6Q96HP0 2047 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 KANSL1LA0AUZ9 987 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 SLC38A8A6NNN8 435 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 HEPACAM2A8MVW5 462 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 A8MXQ7 604 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 DPYSL4O14531 572 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 GDI1P31150 447 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 CYP4F8P98187 520 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 CYP27A1Q02318 531 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 FCHO2Q0JRZ9 810 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 MDH1BQ5I0G3 518 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 C1orf220Q5T0J3 134 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 YAF2Q8IY57 180 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 PJA1Q8NG27 643 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 MRPS31Q92665 395 aaKnown RBP17.76■□□□□ 0.43
PKP3-209ENST00000533069 PCED1BQ96HM7 432 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 SPATA17Q96L03 361 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 TSG101Q99816 390 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 OSBPL6Q9BZF3 934 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 IMPG2Q9BZV3 1241 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 SMYD3Q9H7B4 428 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 EHD2Q9NZN4 543 aa17.76■□□□□ 0.43
PKP3-209ENST00000533069 MAGED2Q9UNF1 606 aaPredicted RBP17.76■□□□□ 0.43
PKP3-209ENST00000533069 ZNF263O14978 683 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 TRIM66O15016 1216 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 CETN3O15182 167 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 ASS1P00966 412 aaKnown RBP17.75■□□□□ 0.43
PKP3-209ENST00000533069 F11P03951 625 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 PTPN1P18031 435 aaKnown RBP17.75■□□□□ 0.43
PKP3-209ENST00000533069 BDNFP23560 247 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 ANXA13P27216 316 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 GTF2H1P32780 548 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 PIK3CAP42336 1068 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 PRCPP42785 496 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 MCCD1P59942 119 aaPredicted RBP17.75■□□□□ 0.43
PKP3-209ENST00000533069 SDHAF4Q5VUM1 108 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 RBM43Q6ZSC3 357 aaKnown RBP17.75■□□□□ 0.43
PKP3-209ENST00000533069 TMEM150AQ86TG1 271 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 DTWD2Q8NBA8 298 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 B3GALNT2Q8NCR0 500 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 TNIP3Q96KP6 325 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 NELL2Q99435 816 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 ELOVL4Q9GZR5 314 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms