RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 FAM32AQ9Y421 112 aaKnown RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 IRF6O14896 467 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 APOA1P02647 267 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 FYNP06241 537 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 GARTP22102 1010 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 HMOX2P30519 316 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 HARS2P49590 506 aaKnown RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 ACVR2BQ13705 512 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 DHX34Q14147 1143 aaKnown RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 C10orf53Q8N6V4 93 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 C1orf131Q8NDD1 294 aaKnown RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 EXD1Q8NHP7 514 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 A1CFQ9NQ94 594 aaKnown RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 ENTPD7Q9NQZ7 604 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 POLE3Q9NRF9 147 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 DTNAQ9Y4J8 743 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 A0A1W2PQJ5 194 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 H7C4K7 107 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 THP07101 528 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 LRRC74AQ0VAA2 488 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 SPARCL1Q14515 664 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 MFSD10Q14728 455 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 ATP11CQ8NB49 1132 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 ATL2Q8NHH9 583 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 MYOM1P52179 1685 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 CYB561D2O14569 222 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 DYRK3O43781 588 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 NBNO60934 754 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 DDHD2O94830 711 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 GYPCP04921 128 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 PNMA6AP0CW24 399 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 SESN2P58004 480 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 SMTNL2Q2TAL5 461 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 CHSY1Q86X52 802 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 CCNYL1Q8N7R7 359 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 TAF1DQ9H5J8 278 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 KBTBD4Q9NVX7 518 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 MPP6Q9NZW5 540 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 DBR1Q9UK59 544 aaKnown RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 AP1G2O75843 785 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 ADCYAP1R1P41586 468 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 PSMC6P62333 389 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 TBL3Q12788 808 aaKnown RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 TRIM71Q2Q1W2 868 aaKnown RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 CENPPQ6IPU0 288 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 FBXO38Q6PIJ6 1188 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 POTEAQ6S8J7 498 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 RGS9BPQ6ZS82 235 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 SNX31Q8N9S9 440 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 HIPK4Q8NE63 616 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 ZNF555Q8NEP9 628 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 CEP70Q8NHQ1 597 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 MS4A14Q96JA4 679 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 AGXT2Q9BYV1 514 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 RANBP17Q9H2T7 1088 aaKnown RBP9.1□□□□□ -0.95
CTNND1-232ENST00000532649 RNF103-CHMP3A0A140T963 221 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 C3orf70A6NLC5 250 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-232ENST00000532649 NUP62P37198 522 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-232ENST00000532649 MAPRE2Q15555 327 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 LRRC8BQ6P9F7 803 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 ZNF720Q7Z2F6 126 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 ACOT1Q86TX2 421 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 TRIM69Q86WT6 500 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 REPS2Q8NFH8 660 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 CGRRF1Q99675 332 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 NDE1Q9NXR1 346 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 PSD3Q9NYI0 1048 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 ADA2Q9NZK5 511 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 TRIM10Q9UDY6 481 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 IFT172Q9UG01 1749 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 ZNF185O15231 689 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 MEFVO15553 781 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-232ENST00000532649 CTIFO43310 598 aaKnown RBP9.09□□□□□ -0.95
CTNND1-232ENST00000532649 TADA3O75528 432 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 KITP10721 976 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 GUCY2CP25092 1073 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 CATSPERGQ6ZRH7 1159 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 EPM2AIP1Q7L775 607 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-232ENST00000532649 RNF135Q8IUD6 432 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 ADGRF2Q8IZF7 708 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 SCFD1Q8WVM8 642 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 ANKS1AQ92625 1134 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 ATXN7L3BQ96GX2 97 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 WDR24Q96S15 920 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 POP1Q99575 1024 aaKnown RBP9.09□□□□□ -0.95
CTNND1-232ENST00000532649 IRX2Q9BZI1 471 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-232ENST00000532649 CATSPERBQ9H7T0 1116 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 HMX1Q9NP08 348 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-232ENST00000532649 SNX12Q9UMY4 172 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 GOLGA8TH3BQL2 631 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 DARSP14868 501 aaKnown RBP9.09□□□□□ -0.95
CTNND1-232ENST00000532649 CD44P16070 742 aaKnown RBP9.09□□□□□ -0.95
CTNND1-232ENST00000532649 SERPINB10P48595 397 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 NUGGCQ68CJ6 796 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 ZNF438Q7Z4V0 828 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 ARHGAP18Q8N392 663 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 TRAPPC12Q8WVT3 735 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 STMN3Q9NZ72 180 aa9.09□□□□□ -0.95
CTNND1-232ENST00000532649 CHORDC1Q9UHD1 332 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-232ENST00000532649 CCDC195A0A1B0GUA6 201 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms