RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 MARSP56192 900 aaKnown RBP15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 CCDC60Q8IWA6 550 aaPredicted RBP15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 TMEM121Q9BTD3 319 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 PSMD3O43242 534 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 GCLCP48506 637 aaPredicted RBP15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 PDK2Q15119 407 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 NDUFAF2Q8N183 169 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 DDX27Q96GQ7 796 aaKnown RBP15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 CXCL11O14625 94 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 POLBP06746 335 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 KRT4P19013 534 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 YWHAHQ04917 246 aaPredicted RBP15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 CACNB2Q08289 660 aaPredicted RBP15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 ZNF235Q14590 738 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 GNASQ5JWF2 1037 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 FAXCQ5TGI0 409 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 ZBTB45Q96K62 511 aaPredicted RBP15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 CYP4F11Q9HBI6 524 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 KLK14Q9P0G3 267 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 BTNL10A8MVZ5 291 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 TRIM49D1C9J1S8 452 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 TGFB1I1O43294 461 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 MTSS1O43312 755 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 INSRRP14616 1297 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 RAP1GAPP47736 663 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 CPT1AP50416 773 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 RAD23BP54727 409 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 TTC39BQ5VTQ0 682 aaPredicted RBP15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 ATPAF2Q8N5M1 289 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 IL31RAQ8NI17 732 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 NKX2-3Q8TAU0 364 aa15.98■□□□□ 0.15
PCDHA3-202ENST00000532566 H3BRB1 525 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 KIF3CO14782 793 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 HOXD10P28358 340 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 SPRP35270 261 aaPredicted RBP15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 PGM1P36871 562 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 RPL21P46778 160 aaKnown RBP15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 AMHR2Q16671 573 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 TSEN2Q8NCE0 465 aaKnown RBP15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 PDZD8Q8NEN9 1154 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 SPDL1Q96EA4 605 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 DCLK3Q9C098 648 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 TUT1Q9H6E5 874 aaKnown RBP15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 MARCOQ9UEW3 520 aaPredicted RBP15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 VAV3Q9UKW4 847 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 USP18Q9UMW8 372 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 GTF2A2P52657 109 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 RNF135Q8IUD6 432 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 TMEM161BQ8NDZ6 487 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 PPHLN1Q8NEY8 458 aaKnown RBP15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 GCNAQ96QF7 691 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 ACKR2O00590 384 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 CSDE1O75534 798 aaKnown RBP15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 ZNF157P51786 506 aaPredicted RBP15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 IRF2BP2Q7Z5L9 587 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 AGR3Q8TD06 166 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 ASAP3Q8TDY4 903 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 STAMBPL1Q96FJ0 436 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 P2RX7Q99572 595 aaKnown RBP15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 HSD3B7Q9H2F3 369 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 TAS2R14Q9NYV8 317 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 CHD2O14647 1828 aaKnown RBP15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 MAP3K6O95382 1288 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 AP2B1P63010 937 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 KDSRQ06136 332 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 ZNF844Q08AG5 666 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 KRT80Q6KB66 452 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 FBXO36Q8NEA4 188 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 LNX1Q8TBB1 728 aaPredicted RBP15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 USP33Q8TEY7 942 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 FAM172AQ8WUF8 416 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 GRID1Q9ULK0 1009 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 KCPQ6ZWJ8 1503 aa15.97■□□□□ 0.15
PCDHA3-202ENST00000532566 ADRB2P07550 413 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 NCAM1P13591 858 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 RXFP2Q8WXD0 754 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 CPB2Q96IY4 423 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 PORCNQ9H237 461 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 MANSC1Q9H8J5 431 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 PCDH9Q9HC56 1237 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 TJP2Q9UDY2 1190 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 VCPP55072 806 aaKnown RBP15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 HUNKP57058 714 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 SHROOM1Q2M3G4 852 aaPredicted RBP15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 TFB1MQ8WVM0 346 aaKnown RBP15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 RIPK2O43353 540 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 PLA2G6O60733 806 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 SNX2O60749 519 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 MCF2P10911 925 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 BCAT1P54687 386 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 ANO4Q32M45 955 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 REPS2Q8NFH8 660 aa15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 MTO1Q9Y2Z2 717 aaKnown RBP15.96■□□□□ 0.15
PCDHA3-202ENST00000532566 M0QYT0 321 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 CLGNO14967 610 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 TRPA1O75762 1119 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 ENO1P06733 434 aaKnown RBP15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 ALDH18A1P54886 795 aaKnown RBP15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 KDELC2Q7Z4H8 507 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 FAM71AQ8IYT1 594 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms