RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 CTU1Q7Z7A3 348 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 MAGEB5Q9BZ81 275 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 MOXD2PA6NHM9 499 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 F8VZ95 297 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 F8W8V4 182 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 SEC31AO94979 1220 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 ADRB2P07550 413 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 SLC2A3P11169 496 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 ICAM3P32942 547 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 IFNAR2P48551 515 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 ZNF131P52739 623 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 NSUN2Q08J23 767 aaKnown RBP eCLIP16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 DUSP9Q99956 384 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 CIPCQ9C0C6 399 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 SMYD3Q9H7B4 428 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 IPPQ9Y573 584 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 CST8O60676 142 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 XYLBO75191 536 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 TLE2Q04725 743 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 CBWD6Q4V339 395 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 CBWD3Q5JTY5 395 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 CBWD5Q5RIA9 395 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 MS4A14Q96JA4 679 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 SF3B1O75533 1304 aaKnown RBP eCLIP16.46■□□□□ 0.233e-6■■■■■ 112.4
PPFIA1-222ENST00000532504 CKBP12277 381 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 RAPGEF5Q92565 580 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 CACNA1FO60840 1977 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 RRM1P23921 792 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 FAM172AQ8WUF8 416 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 IKZF4Q9H2S9 585 aa16.46■□□□□ 0.23
PPFIA1-222ENST00000532504 SCAMP3O14828 347 aaKnown RBP16.46■□□□□ 0.22
PPFIA1-222ENST00000532504 OAS2P29728 719 aaKnown RBP16.46■□□□□ 0.22
PPFIA1-222ENST00000532504 TLR8Q9NR97 1041 aaKnown RBP16.46■□□□□ 0.22
PPFIA1-222ENST00000532504 IGLV3-22A0A075B6J6 115 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 CYP2C18P33260 490 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 NT5DC4Q86YG4 428 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 SPDYE1Q8NFV5 336 aaPredicted RBP16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 ZNF606Q8WXB4 792 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 ADCY6O43306 1168 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 PPP3CAQ08209 521 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 ANKRD20A3Q5VUR7 823 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 SMARCD1Q96GM5 515 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 ZNF185O15231 689 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 APRTP07741 180 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 YWHAQP27348 245 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 MTM1Q13496 603 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 SLC25A41Q8N5S1 370 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 ADAM32Q8TC27 787 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 SPATA18Q8TC71 538 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 LOC102724159A0A0B4J2E5 919 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 SARSP49591 514 aaKnown RBP16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 PWP2Q15269 919 aaKnown RBP16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 SDCCAG8Q86SQ7 713 aaPredicted RBP16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 VSIG1Q86XK7 387 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 USP38Q8NB14 1042 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 ARHGAP39Q9C0H5 1083 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 GOLGA2P5Q9HBQ8 144 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 DMAP1Q9NPF5 467 aaPredicted RBP16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 AMACRQ9UHK6 382 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
PPFIA1-222ENST00000532504 C3orf70A6NLC5 250 aaPredicted RBP16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 SPATA31D3P0C874 917 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 CHRNA3P32297 505 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 BRCC3P46736 316 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 PAPOLAP51003 745 aaKnown RBP16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 SLC12A1Q13621 1099 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 SPATA31D4Q6ZUB0 917 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 WDR24Q96S15 920 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 OSBPL8Q9BZF1 889 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 AFF4Q9UHB7 1163 aaKnown RBP16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 PLAGL2Q9UPG8 496 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 E5RI56 91 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 TUFMP49411 452 aaKnown RBP16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 SCUBE3Q8IX30 993 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 TSPAN3O60637 253 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 FBXO21O94952 628 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 CALCAP01258 141 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 PDIA2Q13087 525 aaKnown RBP16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 ZFP42Q96MM3 310 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 ZNF862O60290 1169 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 C4orf32Q8N8J7 132 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 SYN2Q92777 582 aaPredicted RBP16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 C11orf49Q9H6J7 331 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 RAB6BQ9NRW1 208 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 NDFIP2Q9NV92 336 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 SLC27A5Q9Y2P5 690 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 COL1A2P08123 1366 aa16.44■□□□□ 0.22
PPFIA1-222ENST00000532504 FAM47DPA6NHR8 397 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 ARIH2O95376 493 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 SETSIPP0DME0 302 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 ARSHQ5FYA8 562 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 IZUMO3Q5VZ72 239 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 PLPP4Q5VZY2 271 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 CES5AQ6NT32 575 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 RXFP2Q8WXD0 754 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 BSNDQ8WZ55 320 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 ERLEC1Q96DZ1 483 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 PAWRQ96IZ0 340 aaKnown RBP16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 PARD6BQ9BYG5 372 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms