RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 GOLGA7BQ2TAP0 167 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 B3GALNT2Q8NCR0 500 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 ZNF518BQ9C0D4 1074 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 CRTAC1Q9NQ79 661 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 CNOT8Q9UFF9 292 aaKnown RBP23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 MSRAQ9UJ68 235 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 GTF3C4Q9UKN8 822 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 PCDHGC5Q9Y5F6 944 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 GRXCR1A8MXD5 290 aa23.25■■□□□ 1.31
PACSIN3-209ENST00000532457 NT5C1B-RDH14C9J2C7 533 aa23.25■■□□□ 1.31
PACSIN3-209ENST00000532457 M0QYV0 167 aa23.25■■□□□ 1.31
PACSIN3-209ENST00000532457 TULP2O00295 520 aa23.25■■□□□ 1.31
PACSIN3-209ENST00000532457 GALTP07902 379 aa23.25■■□□□ 1.31
PACSIN3-209ENST00000532457 TKTP29401 623 aaKnown RBP23.25■■□□□ 1.31
PACSIN3-209ENST00000532457 ARHGAP17Q68EM7 881 aa23.25■■□□□ 1.31
PACSIN3-209ENST00000532457 FAM109BQ6ICB4 259 aaPredicted RBP23.25■■□□□ 1.31
PACSIN3-209ENST00000532457 PAQR9Q6ZVX9 377 aa23.25■■□□□ 1.31
PACSIN3-209ENST00000532457 LRRC57Q8N9N7 239 aa23.25■■□□□ 1.31
PACSIN3-209ENST00000532457 MARCH5Q9NX47 278 aa23.25■■□□□ 1.31
PACSIN3-209ENST00000532457 ALDH2P05091 517 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 ODC1P11926 461 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 LHX1P48742 406 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 RABGGTBP53611 331 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 LRIT3Q3SXY7 679 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 PTPN20Q4JDL3 420 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 TMEM173Q86WV6 379 aaPredicted RBP23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 FIBCD1Q8N539 461 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 CPXM1Q96SM3 734 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 CWH43Q9H720 699 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 MYBPHLA2RUH7 354 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 CLDN5O00501 218 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 GABBR2O75899 941 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 ATP1A1P05023 1023 aaKnown RBP23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 SMAD3P84022 425 aaKnown RBP23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 C1QBPQ07021 282 aaKnown RBP23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 TRIM58Q8NG06 486 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 SP7Q8TDD2 431 aaPredicted RBP23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 BCL7CQ8WUZ0 217 aaPredicted RBP23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 VCPIP1Q96JH7 1222 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 TMEM209Q96SK2 561 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 NUP85Q9BW27 656 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 GPR62Q9BZJ7 368 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 TRIM7Q9C029 511 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 CTTNBP2NLQ9P2B4 639 aa23.24■■□□□ 1.31
PACSIN3-209ENST00000532457 CARNS1A5YM72 827 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 BUB1BO60566 1050 aaPredicted RBP23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 TADA2AO75478 443 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 GJB6O95452 261 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 PAX3P23760 479 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 ADORA2BP29275 332 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 BCAR1P56945 870 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 CYP4A22Q5TCH4 519 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 ERICH1Q86X53 443 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 SLC2A14Q8TDB8 520 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 BTBD6Q96KE9 485 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 TNIP3Q96KP6 325 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 PCDHB8Q9UN66 801 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 FAN1Q9Y2M0 1017 aa23.23■■□□□ 1.31
PACSIN3-209ENST00000532457 TCRBV5S1A1TA0A578 114 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 NCK2O43639 380 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 FTCDO95954 541 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 MDH1BQ5I0G3 518 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 SPOUT1Q5T280 376 aaKnown RBP23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 SLFN11Q7Z7L1 901 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 RHOT2Q8IXI1 618 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 FUKQ8N0W3 1084 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 NAPGQ99747 312 aaPredicted RBP23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 PBX4Q9BYU1 374 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 AVENQ9NQS1 362 aaPredicted RBP23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 TSC2P49815 1807 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 CTAGE9A4FU28 777 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 MTA2O94776 668 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 HADHBP55084 474 aaKnown RBP23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 MAMLD1Q13495 774 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 STILQ15468 1287 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 PTPROQ16827 1216 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 PLEKHA7Q6IQ23 1121 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 PMF1Q6P1K2 205 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 LRRTM3Q86VH5 581 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 OR10T2Q8NGX3 314 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 SLC35F5Q8WV83 523 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 SYT15Q9BQS2 421 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 B3GNT5Q9BYG0 378 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 ADAM28Q9UKQ2 775 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 CEP83Q9Y592 693 aa23.22■■□□□ 1.31
PACSIN3-209ENST00000532457 ERBB2P04626 1255 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 MYBL1P10243 752 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 TYMPP19971 482 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 PDE4CQ08493 712 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 OVOS1Q6IE37 1185 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 TAS1R1Q7RTX1 841 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 CPNE8Q86YQ8 564 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 ANKRD52Q8NB46 1076 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 PKMYT1Q99640 499 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 HNRNPABQ99729 332 aaKnown RBP23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 TMEM175Q9BSA9 504 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 COLEC11Q9BWP8 271 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 TLR10Q9BXR5 811 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 ABCB6Q9NP58 842 aa23.21■■□□□ 1.31
PACSIN3-209ENST00000532457 AAASQ9NRG9 546 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms