RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 ZSWIM2Q8NEG5 633 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 SPATA18Q8TC71 538 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 NOC3LQ8WTT2 800 aaKnown RBP16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 USP28Q96RU2 1077 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 TMEM206Q9H813 350 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 ABCB6Q9NP58 842 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 RBM12Q9NTZ6 932 aaKnown RBP16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 DLL3Q9NYJ7 618 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 GTSE1Q9NYZ3 720 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 L1RE1Q9UN81 338 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 MTMR6Q9Y217 621 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 DNAH14Q0VDD8 3507 aa16.33■□□□□ 0.21
DEPDC7-204ENST00000532078 A0A087X0B3 334 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 KIAA0391O15091 583 aaKnown RBP16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 PRPF40AO75400 957 aaKnown RBP16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 TMEM191BP0C7N4 346 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 CSH1P0DML2 217 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 CSH2P0DML3 217 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 SDHBP21912 280 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 NLRP12P59046 1061 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 RPL10AP62906 217 aaKnown RBP16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 LMNB2Q03252 620 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 GAS6Q14393 721 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 LAIR1Q6GTX8 287 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 TTC8Q8TAM2 541 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 ACBD6Q9BR61 282 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 CBWD1Q9BRT8 395 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 PI4K2AQ9BTU6 479 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 SLC46A2Q9BY10 475 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 FGFBP2Q9BYJ0 223 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 PANK2Q9BZ23 570 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 KIF9Q9HAQ2 790 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 TMLHEQ9NVH6 421 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 DDX43Q9NXZ2 648 aaKnown RBP16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 DENND4CQ5VZ89 1909 aa16.33■□□□□ 0.2
DEPDC7-204ENST00000532078 GOLGA8IPA6NC78 632 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 GOLGA8JA6NMD2 632 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 SOBPA7XYQ1 873 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 OBSL1O75147 1896 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 KRT19P08727 400 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 HMGA1P17096 107 aaKnown RBP16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 NASPP49321 788 aaPredicted RBP16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 RBP5P82980 135 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 TNK2Q07912 1038 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 PON2Q15165 354 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 STK38Q15208 465 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 RSPO4Q2I0M5 234 aaPredicted RBP16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 INTS6LQ5JSJ4 861 aaKnown RBP16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 Q6ZS52 159 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 TMEM150AQ86TG1 271 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 ADGRF2Q8IZF7 708 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 GPD1LQ8N335 351 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 SYNPOQ8N3V7 929 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 CSGALNACT2Q8N6G5 542 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 TOP6BLQ8N6T0 577 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 PDILTQ8N807 584 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 MRPS31Q92665 395 aaKnown RBP16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 MTMR12Q9C0I1 747 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 LRRC27Q9C0I9 530 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 SMG9Q9H0W8 520 aaKnown RBP16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 TNMDQ9H2S6 317 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 PCIF1Q9H4Z3 704 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 PDE11AQ9HCR9 933 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 GDAP2Q9NXN4 497 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 UXTQ9UBK9 157 aaPredicted RBP16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 USP18Q9UMW8 372 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 R3HCC1Q9Y3T6 440 aaKnown RBP16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 NCOR2Q9Y618 2525 aa16.32■□□□□ 0.2
DEPDC7-204ENST00000532078 PRR5-ARHGAP8B1AHC4 643 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 STX6O43752 255 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 PRPF6O94906 941 aaKnown RBP16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 F11P03951 625 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 FECHP22830 423 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 PCSK1P29120 753 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 LHX1P48742 406 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 ARHGAP8P85298 464 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 MYO1EQ12965 1108 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 CCINQ13939 588 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 WDR44Q5JSH3 913 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 PRR23BQ6ZRT6 265 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 MAB21L3Q8N8X9 362 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 CXorf38Q8TB03 319 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 TRMT2BQ96GJ1 504 aaKnown RBP16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 ANKRD36BP1Q96IX9 119 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 TDP1Q9NUW8 608 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 MAGED2Q9UNF1 606 aaPredicted RBP16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 SNX9Q9Y5X1 595 aa16.31■□□□□ 0.2
DEPDC7-204ENST00000532078 CHURC1-FNTBB4DL54 471 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 K7ESF4 209 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 TNNC2P02585 160 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 ACAT1P24752 427 aaKnown RBP16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 CNR2P34972 360 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 FNTBP49356 437 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 GPR15P49685 360 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 SURF1Q15526 300 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 LPAL2Q16609 132 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 CFAP221Q4G0U5 840 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 TXNDC8Q6A555 127 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 MON1AQ86VX9 555 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 LONP2Q86WA8 852 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms