RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 CCDC170Q8IYT3 715 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 DCP1BQ8IZD4 617 aaKnown RBP20.2■□□□□ 0.82
SMPD1-205ENST00000531303 FUKQ8N0W3 1084 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 OLIG1Q8TAK6 271 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 ARNTL2Q8WYA1 636 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 PCED1BQ96HM7 432 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 SAMD11Q96NU1 681 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 DESI2Q9BSY9 194 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 RHOBTB2Q9BYZ6 727 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 ZBP1Q9H171 429 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 ENTPD7Q9NQZ7 604 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 MTRRQ9UBK8 725 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 C5orf67F2Z3F1 127 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 TBC1D4O60343 1298 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 OR1D2P34982 312 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 ERVFC1P60507 584 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 GPM6BQ13491 265 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 BMS1Q14692 1282 aaKnown RBP20.19■□□□□ 0.82
SMPD1-205ENST00000531303 NAA35Q5VZE5 725 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 ARHGAP17Q68EM7 881 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 LCLAT1Q6UWP7 414 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 TOGARAM2Q6ZUX3 1019 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 SLC30A5Q8TAD4 765 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 MICAL1Q8TDZ2 1067 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 CPA5Q8WXQ8 436 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 TIFAQ96CG3 184 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 PKMYT1Q99640 499 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 TCF25Q9BQ70 676 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 ZNF518BQ9C0D4 1074 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 TAS2R14Q9NYV8 317 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 HESX1Q9UBX0 185 aa20.19■□□□□ 0.82
SMPD1-205ENST00000531303 NDUFA10O95299 355 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 CTSAP10619 480 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 STILQ15468 1287 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 SLC18A3Q16572 532 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 CCDC122Q5T0U0 273 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 PLPP4Q5VZY2 271 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 PAQR9Q6ZVX9 377 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 SPATA2LQ8IUW3 424 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-205ENST00000531303 ACRBPQ8NEB7 543 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 HNRNPABQ99729 332 aaKnown RBP20.18■□□□□ 0.82
SMPD1-205ENST00000531303 CLSTN3Q9BQT9 956 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 ABI2Q9NYB9 513 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-205ENST00000531303 STK39Q9UEW8 545 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 PYCARDQ9ULZ3 195 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 PCDHGC3Q9UN70 934 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 LZTS1Q9Y250 596 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 PCDHGC5Q9Y5F6 944 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 BACE2Q9Y5Z0 518 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-205ENST00000531303 SPA17Q15506 151 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 PTPN14Q15678 1187 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 MAPRE1Q15691 268 aaKnown RBP20.18■□□□□ 0.82
SMPD1-205ENST00000531303 CLEC16AQ2KHT3 1053 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 ALKBH5Q6P6C2 394 aaKnown RBP20.18■□□□□ 0.82
SMPD1-205ENST00000531303 FAM35AQ86V20 835 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 TTC30AQ86WT1 665 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 C1orf131Q8NDD1 294 aaKnown RBP20.18■□□□□ 0.82
SMPD1-205ENST00000531303 SECISBP2LQ93073 1101 aaKnown RBP20.18■□□□□ 0.82
SMPD1-205ENST00000531303 TLR9Q9NR96 1032 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 KRT82Q9NSB4 513 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 NAGPAQ9UK23 515 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 COLQQ9Y215 455 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-205ENST00000531303 CEP83Q9Y592 693 aa20.18■□□□□ 0.82
SMPD1-205ENST00000531303 TRIOBPQ9H2D6 2365 aa20.17■□□□□ 0.82
SMPD1-205ENST00000531303 ZNF263O14978 683 aa20.17■□□□□ 0.82
SMPD1-205ENST00000531303 AP1G2O75843 785 aa20.17■□□□□ 0.82
SMPD1-205ENST00000531303 IPO7O95373 1038 aaKnown RBP20.17■□□□□ 0.82
SMPD1-205ENST00000531303 BDNFP23560 247 aa20.17■□□□□ 0.82
SMPD1-205ENST00000531303 ANXA13P27216 316 aa20.17■□□□□ 0.82
SMPD1-205ENST00000531303 SMAD3P84022 425 aaKnown RBP20.17■□□□□ 0.82
SMPD1-205ENST00000531303 TRIM72Q6ZMU5 477 aa20.17■□□□□ 0.82
SMPD1-205ENST00000531303 RNF19BQ6ZMZ0 732 aa20.17■□□□□ 0.82
SMPD1-205ENST00000531303 ANKRD52Q8NB46 1076 aa20.17■□□□□ 0.82
SMPD1-205ENST00000531303 ATAD1Q8NBU5 361 aa20.17■□□□□ 0.82
SMPD1-205ENST00000531303 TMEM35BQ8NCS4 154 aa20.17■□□□□ 0.82
SMPD1-205ENST00000531303 OXCT2Q9BYC2 517 aaPredicted RBP20.17■□□□□ 0.82
SMPD1-205ENST00000531303 PTPRDP23468 1912 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 EIF3CLB5ME19 914 aaKnown RBP20.16■□□□□ 0.82
SMPD1-205ENST00000531303 H3BNC9 293 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 TULP2O00295 520 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 FAM200BP0CF97 657 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 CYP2F1P24903 491 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 NOMO3P69849 1222 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 ROR1Q01973 937 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 UBE3AQ05086 875 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 PDE4CQ08493 712 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 GPR17Q13304 367 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 NFE2Q16621 373 aaPredicted RBP20.16■□□□□ 0.82
SMPD1-205ENST00000531303 SLC8B1Q6J4K2 584 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 C4orf50Q6ZRC1 276 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 WDTC1Q8N5D0 677 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 GDPD5Q8WTR4 605 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 EIF3CQ99613 913 aaKnown RBP20.16■□□□□ 0.82
SMPD1-205ENST00000531303 LHX5Q9H2C1 402 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 SSX2IPQ9Y2D8 614 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 PCDHB5Q9Y5E4 795 aa20.16■□□□□ 0.82
SMPD1-205ENST00000531303 ATP8B3O60423 1300 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 EPOPA6NHQ4 379 aa20.15■□□□□ 0.82
SMPD1-205ENST00000531303 HIDE1A8MVS5 230 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms