RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 ZNF516Q92618 1163 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 DNASE1L2Q92874 299 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 SMARCE1Q969G3 411 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 CEP295NLQ96MC4 621 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 LPIN3Q9BQK8 851 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 PI4K2AQ9BTU6 479 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 GTPBP4Q9BZE4 634 aaKnown RBP11.75□□□□□ -0.53
CAPN1-221ENST00000531068 OSBPL6Q9BZF3 934 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 PLA2G2FQ9BZM2 168 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 HSD3B7Q9H2F3 369 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 TASP1Q9H6P5 420 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 TRPV5Q9NQA5 729 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 TMLHEQ9NVH6 421 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 RMND1Q9NWS8 449 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 MAGEC2Q9UBF1 373 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-221ENST00000531068 PTPRJQ12913 1337 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 H0Y858 1186 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 MAPK13O15264 365 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 PDGFRBP09619 1106 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 P4HA1P13674 534 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 GLULP15104 373 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 CD44P16070 742 aaKnown RBP11.74□□□□□ -0.53
CAPN1-221ENST00000531068 ATF6P18850 670 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 FCARP24071 287 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 CYP2F1P24903 491 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 DDX6P26196 483 aaKnown RBP eCLIP11.74□□□□□ -0.53
CAPN1-221ENST00000531068 HOXD11P31277 338 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-221ENST00000531068 VIPR2P41587 438 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 MYL6P60660 151 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 BIRC3Q13489 604 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 GRM2Q14416 872 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 NFIL3Q16649 462 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 CT47A1Q5JQC4 288 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-221ENST00000531068 GPR158Q5T848 1215 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 CEP135Q66GS9 1140 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 SCARA3Q6AZY7 606 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 VSTM1Q6UX27 236 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 ARID3BQ8IVW6 561 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-221ENST00000531068 DHX40Q8IX18 779 aaKnown RBP11.74□□□□□ -0.53
CAPN1-221ENST00000531068 GUF1Q8N442 669 aaKnown RBP11.74□□□□□ -0.53
CAPN1-221ENST00000531068 MLKLQ8NB16 471 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 OR6B3Q8NGW1 331 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 KBTBD7Q8WVZ9 684 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 FAM84AQ96KN4 292 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 PKMYT1Q99640 499 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 SYT15Q9BQS2 421 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 DDX23Q9BUQ8 820 aaKnown RBP11.74□□□□□ -0.53
CAPN1-221ENST00000531068 ZNF334Q9HCZ1 680 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-221ENST00000531068 THG1LQ9NWX6 298 aaKnown RBP11.74□□□□□ -0.53
CAPN1-221ENST00000531068 OBP2AQ9NY56 170 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 EHD2Q9NZN4 543 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 UXTQ9UBK9 157 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-221ENST00000531068 ZKSCAN5Q9Y2L8 839 aa11.74□□□□□ -0.53
CAPN1-221ENST00000531068 MYBPHLA2RUH7 354 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 FAM170BA6NMN3 283 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 LRRIQ3A6PVS8 624 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-221ENST00000531068 HEPACAM2A8MVW5 462 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 CHADO15335 359 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 AP5Z1O43299 807 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 C4BPAP04003 597 aaKnown RBP11.73□□□□□ -0.53
CAPN1-221ENST00000531068 KRT13P13646 458 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 HMGA1P17096 107 aaKnown RBP11.73□□□□□ -0.53
CAPN1-221ENST00000531068 LMO2P25791 158 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 MSNP26038 577 aaKnown RBP11.73□□□□□ -0.53
CAPN1-221ENST00000531068 GDI1P31150 447 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 MAGEA9P43362 315 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 MAGEA11P43364 429 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 ZNF165P49910 485 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 CDR1P51861 262 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 MLLT6P55198 1093 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-221ENST00000531068 ENPEPQ07075 957 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 NCOA4Q13772 614 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 DDR2Q16832 855 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 SGSM1Q2NKQ1 1148 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 C1orf228Q6PIY5 440 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 VITQ6UXI7 678 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 ALYREFQ86V81 257 aaKnown RBP11.73□□□□□ -0.53
CAPN1-221ENST00000531068 OSTM1Q86WC4 334 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 SCN4BQ8IWT1 228 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 PJA1Q8NG27 643 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 MRPS31Q92665 395 aaKnown RBP11.73□□□□□ -0.53
CAPN1-221ENST00000531068 TAF4BQ92750 862 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 BCO2Q9BYV7 579 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 VRTNQ9H8Y1 702 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 NXF1Q9UBU9 619 aaKnown RBP11.73□□□□□ -0.53
CAPN1-221ENST00000531068 TRIOO75962 3097 aa11.73□□□□□ -0.53
CAPN1-221ENST00000531068 A8MXQ7 604 aa11.72□□□□□ -0.53
CAPN1-221ENST00000531068 NRG2O14511 850 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-221ENST00000531068 ATP2C2O75185 946 aa11.72□□□□□ -0.53
CAPN1-221ENST00000531068 CLSTN1O94985 981 aa11.72□□□□□ -0.53
CAPN1-221ENST00000531068 F11P03951 625 aa11.72□□□□□ -0.53
CAPN1-221ENST00000531068 PTPN1P18031 435 aaKnown RBP11.72□□□□□ -0.53
CAPN1-221ENST00000531068 TRIM21P19474 475 aaKnown RBP11.72□□□□□ -0.53
CAPN1-221ENST00000531068 NR2F2P24468 414 aa11.72□□□□□ -0.53
CAPN1-221ENST00000531068 AVPR1AP37288 418 aa11.72□□□□□ -0.53
CAPN1-221ENST00000531068 GRIK1P39086 918 aa11.72□□□□□ -0.53
CAPN1-221ENST00000531068 VAMP7P51809 220 aa11.72□□□□□ -0.53
CAPN1-221ENST00000531068 PLCB2Q00722 1185 aa11.72□□□□□ -0.53
CAPN1-221ENST00000531068 FCHO2Q0JRZ9 810 aa11.72□□□□□ -0.53
CAPN1-221ENST00000531068 ADAM9Q13443 819 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms