RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 TAF4BQ92750 862 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 EEF2KMTQ96G04 330 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 PCED1BQ96HM7 432 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 SDCBP2Q9H190 292 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 ATXN3LQ9H3M9 355 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 DPEP3Q9H4B8 488 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 ARHGEF3Q9NR81 526 aa20.28■□□□□ 0.84
UBXN1-211ENST00000531056 TRIM49BA6NDI0 452 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 CETN3O15182 167 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 NOL4O94818 638 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 CSH1P0DML2 217 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 CSH2P0DML3 217 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 BMP6P22004 513 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 RAP1GAPP47736 663 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 GCLMP48507 274 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 CLCN5P51795 746 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 CDH8P55286 799 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 UBE2HP62256 183 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 CYP4F8P98187 520 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 TAF12Q16514 161 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 MDH1BQ5I0G3 518 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 ANKRD40Q6AI12 368 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 VITQ6UXI7 678 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 SCARA5Q6ZMJ2 495 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 TSG101Q99816 390 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 SLITRK6Q9H5Y7 841 aa20.27■□□□□ 0.84
UBXN1-211ENST00000531056 MAGEC2Q9UBF1 373 aaPredicted RBP20.27■□□□□ 0.84
UBXN1-211ENST00000531056 KIF26AQ9ULI4 1882 aaPredicted RBP20.26■□□□□ 0.83
UBXN1-211ENST00000531056 SLC16A3O15427 465 aaKnown RBP20.26■□□□□ 0.83
UBXN1-211ENST00000531056 F11P03951 625 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 EPB41P11171 864 aaKnown RBP20.26■□□□□ 0.83
UBXN1-211ENST00000531056 CD44P16070 742 aaKnown RBP20.26■□□□□ 0.83
UBXN1-211ENST00000531056 PTPN1P18031 435 aaKnown RBP20.26■□□□□ 0.83
UBXN1-211ENST00000531056 VIPR2P41587 438 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 NLRP12P59046 1061 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 LRRC63Q05C16 580 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 MORC3Q14149 939 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 ARHGAP15Q53QZ3 475 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 GPR158Q5T848 1215 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 ISM2Q6H9L7 571 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 SPOPLQ6IQ16 392 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 VSTM1Q6UX27 236 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 B3GALNT2Q8NCR0 500 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 PRSS33Q8NF86 280 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 FLCNQ8NFG4 579 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 TAS1R2Q8TE23 839 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 RSPRY1Q96DX4 576 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 TRMT2BQ96GJ1 504 aaKnown RBP20.26■□□□□ 0.83
UBXN1-211ENST00000531056 TMEM8AQ9HCN3 771 aa20.26■□□□□ 0.83
UBXN1-211ENST00000531056 SLC38A8A6NNN8 435 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 A8MXQ7 604 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 TADA3O75528 432 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 CLSTN1O94985 981 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 AOC1P19801 751 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 BDNFP23560 247 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 CCNE1P24864 410 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 WEE1P30291 646 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 GTF2H1P32780 548 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 ASPAP45381 313 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 FKBP3Q00688 224 aaKnown RBP20.25■□□□□ 0.83
UBXN1-211ENST00000531056 PFKPQ01813 784 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 CYP27A1Q02318 531 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 GRM2Q14416 872 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 SCN4BQ8IWT1 228 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 SPATA17Q96L03 361 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 MYRFLQ96LU7 910 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 GCNAQ96QF7 691 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 TASP1Q9H6P5 420 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 TBC1D17Q9HA65 648 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 APOBEC3GQ9HC16 384 aaKnown RBP20.25■□□□□ 0.83
UBXN1-211ENST00000531056 MAGED2Q9UNF1 606 aaPredicted RBP20.25■□□□□ 0.83
UBXN1-211ENST00000531056 TICRRQ7Z2Z1 1910 aa20.25■□□□□ 0.83
UBXN1-211ENST00000531056 ANAPC1Q9H1A4 1944 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 HEPACAM2A8MVW5 462 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 PSMA7O14818 248 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 PI15O43692 258 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 P4HA1P13674 534 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 PSMC3P17980 439 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 PPP1R2P41236 205 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 NUBP1P53384 320 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 STARD6P59095 220 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 STIM1Q13586 685 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 PHLDB3Q6NSJ2 640 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 ARID3BQ8IVW6 561 aaPredicted RBP20.24■□□□□ 0.83
UBXN1-211ENST00000531056 DEPDC1BQ8WUY9 529 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 E2F7Q96AV8 911 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 DHTKD1Q96HY7 919 aaPredicted RBP20.24■□□□□ 0.83
UBXN1-211ENST00000531056 CEP295NLQ96MC4 621 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 BCO2Q9BYV7 579 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 MMRN2Q9H8L6 949 aa20.24■□□□□ 0.83
UBXN1-211ENST00000531056 UXTQ9UBK9 157 aaPredicted RBP20.24■□□□□ 0.83
UBXN1-211ENST00000531056 MUC6Q6W4X9 2439 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 PPP1R3GB7ZBB8 358 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 NOP14P78316 857 aaKnown RBP20.23■□□□□ 0.83
UBXN1-211ENST00000531056 MLF2Q15773 248 aaPredicted RBP20.23■□□□□ 0.83
UBXN1-211ENST00000531056 SLC44A4Q53GD3 710 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 KRT39Q6A163 491 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 MFSD6LQ8IWD5 586 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 DNASE1L2Q92874 299 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 PRRX2Q99811 253 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms