RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 FAM26FQ5R3K3 315 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 TXNDC8Q6A555 127 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 LIMS2Q7Z4I7 341 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 MON1AQ86VX9 555 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 USP13Q92995 863 aaPredicted RBP16.93■□□□□ 0.3
CPSF1-205ENST00000531042 RMDN1Q96DB5 314 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 TRMT2BQ96GJ1 504 aaKnown RBP16.93■□□□□ 0.3
CPSF1-205ENST00000531042 HPDLQ96IR7 371 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 GKN1Q9NS71 199 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 CCL26Q9Y258 94 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 GPR179Q6PRD1 2367 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 POLR2DO15514 142 aaKnown RBP16.92■□□□□ 0.3
CPSF1-205ENST00000531042 NOL4O94818 638 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 ZSCAN22P10073 491 aaPredicted RBP16.92■□□□□ 0.3
CPSF1-205ENST00000531042 PDIA4P13667 645 aaKnown RBP16.92■□□□□ 0.3
CPSF1-205ENST00000531042 EHHADHQ08426 723 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 FAM171BQ6P995 826 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 UNC13DQ70J99 1090 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 SPATA2LQ8IUW3 424 aaPredicted RBP16.92■□□□□ 0.3
CPSF1-205ENST00000531042 WDR49Q8IV35 697 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 KBTBD7Q8WVZ9 684 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 MRPS31Q92665 395 aaKnown RBP16.92■□□□□ 0.3
CPSF1-205ENST00000531042 FUBP3Q96I24 572 aaKnown RBP eCLIP16.92■□□□□ 0.3
CPSF1-205ENST00000531042 MYRFLQ96LU7 910 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 FAM83CQ9BQN1 747 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 KIF9Q9HAQ2 790 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 MAGEF1Q9HAY2 307 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 AGPAT3Q9NRZ7 376 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 TDP1Q9NUW8 608 aa16.92■□□□□ 0.3
CPSF1-205ENST00000531042 UXTQ9UBK9 157 aaPredicted RBP16.92■□□□□ 0.3
CPSF1-205ENST00000531042 ATP2C2O75185 946 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 TADA3O75528 432 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 PAPSS2O95340 614 aaPredicted RBP16.91■□□□□ 0.3
CPSF1-205ENST00000531042 F13A1P00488 732 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 LMO2P25791 158 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 CCINQ13939 588 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 ZNF268Q14587 947 aaPredicted RBP16.91■□□□□ 0.3
CPSF1-205ENST00000531042 SNRNP35Q16560 246 aaKnown RBP16.91■□□□□ 0.3
CPSF1-205ENST00000531042 FOXD4L6Q3SYB3 417 aaPredicted RBP16.91■□□□□ 0.3
CPSF1-205ENST00000531042 FOXD4L3Q6VB84 417 aaPredicted RBP16.91■□□□□ 0.3
CPSF1-205ENST00000531042 Q6ZS52 159 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 TRAPPC11Q7Z392 1133 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 RDH13Q8NBN7 331 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 SCFD1Q8WVM8 642 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 SECISBP2LQ93073 1101 aaKnown RBP16.91■□□□□ 0.3
CPSF1-205ENST00000531042 HPS4Q9NQG7 708 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 PCDHA7Q9UN72 937 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 UBE4BO95155 1302 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 DNAH14Q0VDD8 3507 aa16.91■□□□□ 0.3
CPSF1-205ENST00000531042 GREB1Q4ZG55 1949 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 CACNA1AO00555 2505 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 CLIC2O15247 247 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 CASP1P29466 404 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 MAGEA11P43364 429 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 SNRPFP62306 86 aaKnown RBP16.9■□□□□ 0.3
CPSF1-205ENST00000531042 RUNX3Q13761 415 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 TRIM68Q6AZZ1 485 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 C4orf50Q6ZRC1 276 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 HSCBQ8IWL3 235 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 SCN4BQ8IWT1 228 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 NELFCDQ8IXH7 590 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 SYNPOQ8N3V7 929 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 GPR161Q8N6U8 529 aaKnown RBP16.9■□□□□ 0.3
CPSF1-205ENST00000531042 RIN3Q8TB24 985 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 SYT15Q9BQS2 421 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 BLZF1Q9H2G9 400 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 MAGEC2Q9UBF1 373 aaPredicted RBP16.9■□□□□ 0.3
CPSF1-205ENST00000531042 CDH9Q9ULB4 789 aa16.9■□□□□ 0.3
CPSF1-205ENST00000531042 OTOL1A6NHN0 477 aaPredicted RBP16.89■□□□□ 0.29
CPSF1-205ENST00000531042 K7ESF4 209 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 CST3P01034 146 aaPredicted RBP16.89■□□□□ 0.29
CPSF1-205ENST00000531042 HSP90AA1P07900 732 aaKnown RBP16.89■□□□□ 0.29
CPSF1-205ENST00000531042 DLATP10515 647 aaKnown RBP16.89■□□□□ 0.29
CPSF1-205ENST00000531042 TNNI1P19237 187 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 WARSP23381 471 aaKnown RBP16.89■□□□□ 0.29
CPSF1-205ENST00000531042 ME1P48163 572 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 PSMC1P62191 440 aaKnown RBP16.89■□□□□ 0.29
CPSF1-205ENST00000531042 CYP24A1Q07973 514 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 DMWDQ09019 674 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 PSMD6Q15008 389 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 RESP18Q5W5W9 173 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 XXYLT1Q8NBI6 393 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 MYLPFQ96A32 169 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 CHFRQ96EP1 664 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 FNBP1Q96RU3 617 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 MMS19Q96T76 1030 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 CGRRF1Q99675 332 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 EBF3Q9H4W6 596 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 CRTAC1Q9NQ79 661 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 C2orf42Q9NWW7 574 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 FAM13BQ9NYF5 915 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 ANAPC1Q9H1A4 1944 aa16.89■□□□□ 0.29
CPSF1-205ENST00000531042 PTPRDP23468 1912 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 PVALEFA0A1B0GWK0 134 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 CHURC1-FNTBB4DL54 471 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 PDGFRBP09619 1106 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 FNTBP49356 437 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 CYP2J2P51589 502 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 CUL4BQ13620 913 aa16.88■□□□□ 0.29
CPSF1-205ENST00000531042 PUM1Q14671 1186 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■■■□□ 17.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms