RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 SOX13Q9UN79 622 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 CLEC11AQ9Y240 323 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 PTPN22Q9Y2R2 807 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 SPATA31A5Q5VU36 1347 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 SPATA31A6Q5VVP1 1343 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 SPATA31A7Q8IWB4 1347 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 ARID2Q68CP9 1835 aa8.51□□□□□ -1.05
CSDE1-214ENST00000530886 TTC34A8MYJ7 566 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 K7EPI3 171 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 KMOO15229 486 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 PIK3CAP42336 1068 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ATP6V0D1P61421 351 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 NKX1-1Q15270 411 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-214ENST00000530886 CNGA3Q16281 694 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ZNF394Q53GI3 561 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 HYIQ5T013 277 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 PHF12Q96QT6 1004 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 DOK1Q99704 481 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 DHRS4Q9BTZ2 278 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 MAN1C1Q9NR34 630 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 DNM3Q9UQ16 869 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ERVK-11Q9UQG0 969 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 TCRBV7S2A1N4TA0A589 114 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 EML1O00423 815 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 RGS13O14921 159 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 BMP10O95393 424 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 C6orf222P0C671 652 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ATF2P15336 505 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 MAGEA4P43358 317 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ALDH1A3P47895 512 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 HSD17B4P51659 736 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 TRIP10Q15642 601 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 FAAH2Q6GMR7 532 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 AGMOQ6ZNB7 445 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 LPCAT2Q7L5N7 544 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ADAMTS16Q8TE57 1224 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 KANSL2Q9H9L4 492 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 TRNAU1APQ9NX07 287 aaKnown RBP8.5□□□□□ -1.05
CSDE1-214ENST00000530886 PSMC3IPQ9P2W1 217 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ITM2BQ9Y287 266 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ZNF652Q9Y2D9 606 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ERVV-2B6SEH9 535 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 SLC16A3O15427 465 aaKnown RBP8.5□□□□□ -1.05
CSDE1-214ENST00000530886 SLC26A4O43511 780 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 FBXO21O94952 628 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 SRGAP2CP0DJJ0 459 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 SRGAP2BP0DMP2 458 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ACAT1P24752 427 aaKnown RBP8.5□□□□□ -1.05
CSDE1-214ENST00000530886 NT5C2P49902 561 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 EFTUD2Q15029 972 aaKnown RBP eCLIP8.5□□□□□ -1.051e-9■□□□□ 8.8
CSDE1-214ENST00000530886 ANKDD1AQ495B1 522 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 DCAF6Q58WW2 860 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 FAM26FQ5R3K3 315 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 CLEC4GQ6UXB4 293 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 LDHAL6AQ6ZMR3 332 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 TTC7BQ86TV6 843 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ITIH5Q86UX2 942 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 GPR180Q86V85 440 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 DGKHQ86XP1 1220 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ATP6V0D2Q8N8Y2 350 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 BANPQ8N9N5 519 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 TTC13Q8NBP0 860 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 GSTCDQ8NEC7 633 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ADCY4Q8NFM4 1077 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ACTRT2Q8TDY3 377 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 MZB1Q8WU39 189 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 PYDC1Q8WXC3 89 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 CEP95Q96GE4 821 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 CLPTM1LQ96KA5 538 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 C7orf26Q96N11 449 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 RBM15Q96T37 977 aaKnown RBP eCLIP8.5□□□□□ -1.053e-7■■■■□ 23.4
CSDE1-214ENST00000530886 NDEL1Q9GZM8 345 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 THAP2Q9H0W7 228 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 ASIC3Q9UHC3 531 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 INPP5FQ9Y2H2 1132 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 IFT52Q9Y366 437 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 N6AMT1Q9Y5N5 214 aa8.5□□□□□ -1.05
CSDE1-214ENST00000530886 MROH5Q6ZUA9 1318 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 ANKRD34BA5PLL1 514 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 KLRF2D3W0D1 207 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 SNAP23O00161 211 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 SLC22A1O15245 554 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 FAM189A1O60320 539 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 FAM155BO75949 473 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 MYL2P10916 166 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 ADRA1DP25100 572 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 MARCKSL1P49006 195 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 HIRAP54198 1017 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-214ENST00000530886 C21orf59P57076 290 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 MECOMQ03112 1051 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 CENPCQ03188 943 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 CCDC14Q49A88 953 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 EFHC2Q5JST6 749 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 NANOGP8Q6NSW7 305 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 RFX8Q6ZV50 586 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 NLRP10Q86W26 655 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 MINDY2Q8NBR6 621 aa8.49□□□□□ -1.05
CSDE1-214ENST00000530886 PSPC1Q8WXF1 523 aaKnown RBP8.49□□□□□ -1.05
CSDE1-214ENST00000530886 PRPF18Q99633 342 aaKnown RBP8.49□□□□□ -1.05
CSDE1-214ENST00000530886 DCLK3Q9C098 648 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms