RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 CEP250Q9BV73 2442 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 GABRDO14764 452 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 POLR2DO15514 142 aaKnown RBP22.4■■□□□ 1.18
SMPD1-204ENST00000530395 NOL4O94818 638 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 F13A1P00488 732 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 TDGF1P13385 188 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 HOXD13P35453 343 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 ME1P48163 572 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 SNRPFP62306 86 aaKnown RBP22.4■■□□□ 1.18
SMPD1-204ENST00000530395 SNRNP35Q16560 246 aaKnown RBP22.4■■□□□ 1.18
SMPD1-204ENST00000530395 DDR2Q16832 855 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 SOWAHAQ2M3V2 549 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 FOXD4L6Q3SYB3 417 aaPredicted RBP22.4■■□□□ 1.18
SMPD1-204ENST00000530395 SDHAF4Q5VUM1 108 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 TXNDC11Q6PKC3 985 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 FOXD4L3Q6VB84 417 aaPredicted RBP22.4■■□□□ 1.18
SMPD1-204ENST00000530395 C4orf50Q6ZRC1 276 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 UNC13DQ70J99 1090 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 HS2ST1Q7LGA3 356 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 TRMT2BQ96GJ1 504 aaKnown RBP22.4■■□□□ 1.18
SMPD1-204ENST00000530395 PKMYT1Q99640 499 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 AGPAT3Q9NRZ7 376 aa22.4■■□□□ 1.18
SMPD1-204ENST00000530395 SATB1Q01826 763 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 TNK2Q07912 1038 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 PON2Q15165 354 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 TXNDC8Q6A555 127 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 SCARA3Q6AZY7 606 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 ATL3Q6DD88 541 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 MON1AQ86VX9 555 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 GPR161Q8N6U8 529 aaKnown RBP22.39■■□□□ 1.17
SMPD1-204ENST00000530395 STKLD1Q8NE28 680 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 FNBP1Q96RU3 617 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 SYT15Q9BQS2 421 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 RBM12Q9NTZ6 932 aaKnown RBP22.39■■□□□ 1.17
SMPD1-204ENST00000530395 TDP1Q9NUW8 608 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 RAB23Q9ULC3 237 aa22.39■■□□□ 1.17
SMPD1-204ENST00000530395 PTPRDP23468 1912 aa22.38■■□□□ 1.17
SMPD1-204ENST00000530395 GREB1Q4ZG55 1949 aa22.38■■□□□ 1.17
SMPD1-204ENST00000530395 DLATP10515 647 aaKnown RBP22.38■■□□□ 1.17
SMPD1-204ENST00000530395 TNNI1P19237 187 aa22.38■■□□□ 1.17
SMPD1-204ENST00000530395 ZNF268Q14587 947 aaPredicted RBP22.38■■□□□ 1.17
SMPD1-204ENST00000530395 MAPRE1Q15691 268 aaKnown RBP22.38■■□□□ 1.17
SMPD1-204ENST00000530395 CC2D1AQ6P1N0 951 aaPredicted RBP22.38■■□□□ 1.17
SMPD1-204ENST00000530395 SCN4BQ8IWT1 228 aa22.38■■□□□ 1.17
SMPD1-204ENST00000530395 SYNPOQ8N3V7 929 aa22.38■■□□□ 1.17
SMPD1-204ENST00000530395 XXYLT1Q8NBI6 393 aa22.38■■□□□ 1.17
SMPD1-204ENST00000530395 USP13Q92995 863 aaPredicted RBP22.38■■□□□ 1.17
SMPD1-204ENST00000530395 MYRFLQ96LU7 910 aa22.38■■□□□ 1.17
SMPD1-204ENST00000530395 GKN1Q9NS71 199 aa22.38■■□□□ 1.17
SMPD1-204ENST00000530395 CFAP45Q9UL16 551 aa22.38■■□□□ 1.17
SMPD1-204ENST00000530395 CDH9Q9ULB4 789 aa22.38■■□□□ 1.17
SMPD1-204ENST00000530395 CCL26Q9Y258 94 aa22.38■■□□□ 1.17
SMPD1-204ENST00000530395 TGFB1I1O43294 461 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 MAGEA11P43364 429 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 CYP2J2P51589 502 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 GAS6Q14393 721 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 FAM171BQ6P995 826 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 TRAPPC11Q7Z392 1133 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 NELFCDQ8IXH7 590 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 FSIP1Q8NA03 581 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 RDH13Q8NBN7 331 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 SCFD1Q8WVM8 642 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 KBTBD7Q8WVZ9 684 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 MMS19Q96T76 1030 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 FAM83CQ9BQN1 747 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 TRPC7Q9HCX4 862 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 CGNQ9P2M7 1197 aaKnown RBP22.37■■□□□ 1.17
SMPD1-204ENST00000530395 MAGEC2Q9UBF1 373 aaPredicted RBP22.37■■□□□ 1.17
SMPD1-204ENST00000530395 GMEB2Q9UKD1 530 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 ANAPC1Q9H1A4 1944 aa22.37■■□□□ 1.17
SMPD1-204ENST00000530395 CLIC2O15247 247 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 HCRTO43612 131 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 PAPSS2O95340 614 aaPredicted RBP22.36■■□□□ 1.17
SMPD1-204ENST00000530395 WARSP23381 471 aaKnown RBP22.36■■□□□ 1.17
SMPD1-204ENST00000530395 PSMC1P62191 440 aaKnown RBP22.36■■□□□ 1.17
SMPD1-204ENST00000530395 AMPD2Q01433 879 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 EHHADHQ08426 723 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 RUNX3Q13761 415 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 CCINQ13939 588 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 PSMD6Q15008 389 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 CCDC142Q17RM4 750 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 RESP18Q5W5W9 173 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 VSTM1Q6UX27 236 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 Q6ZS52 159 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 LIMS2Q7Z4I7 341 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 MYLPFQ96A32 169 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 CCDC127Q96BQ5 260 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 RMDN1Q96DB5 314 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 CGRRF1Q99675 332 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 BLZF1Q9H2G9 400 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 PCDHA7Q9UN72 937 aa22.36■■□□□ 1.17
SMPD1-204ENST00000530395 HELZP42694 1942 aaKnown RBP22.35■■□□□ 1.17
SMPD1-204ENST00000530395 TRAV19A0A0A6YYK7 116 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 PVALEFA0A1B0GWK0 134 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 TADA3O75528 432 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 CKMP06732 381 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 USP17L7P0C7H9 530 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 CYP24A1Q07973 514 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 PDGFRLQ15198 375 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 BMT2Q1RMZ1 405 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms