RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 BZW2Q9Y6E2 419 aaKnown RBP11.3□□□□□ -0.6
SOX6-213ENST00000530378 EPN1Q9Y6I3 576 aaPredicted RBP11.3□□□□□ -0.6
SOX6-213ENST00000530378 PLXNA3P51805 1871 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 MYO16Q9Y6X6 1858 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 OAZ2O95190 189 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 EFEMP2O95967 443 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 DNAJB1P25685 340 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 CYLC1P35663 651 aaPredicted RBP11.3□□□□□ -0.6
SOX6-213ENST00000530378 RGS7P49802 495 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 CACNA2D1P54289 1103 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 KRT17Q04695 432 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 ASTE1Q2TB18 679 aaPredicted RBP11.3□□□□□ -0.6
SOX6-213ENST00000530378 CCDC122Q5T0U0 273 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 PLPP4Q5VZY2 271 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 LLGL2Q6P1M3 1020 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 DDX53Q86TM3 631 aaKnown RBP11.3□□□□□ -0.6
SOX6-213ENST00000530378 TTC30AQ86WT1 665 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 FMNL3Q8IVF7 1028 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 FUKQ8N0W3 1084 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 ARNTL2Q8WYA1 636 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 SECISBP2LQ93073 1101 aaKnown RBP11.3□□□□□ -0.6
SOX6-213ENST00000530378 ENTPD7Q9NQZ7 604 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 ABI2Q9NYB9 513 aaPredicted RBP11.3□□□□□ -0.6
SOX6-213ENST00000530378 CYTH4Q9UIA0 394 aa11.3□□□□□ -0.6
SOX6-213ENST00000530378 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.3□□□□□ -0.6
SOX6-213ENST00000530378 REV3LO60673 3130 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.29□□□□□ -0.6
SOX6-213ENST00000530378 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.29□□□□□ -0.6
SOX6-213ENST00000530378 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.29□□□□□ -0.6
SOX6-213ENST00000530378 SSU72P8A0A1W2PR75 194 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 USP27XA6NNY8 438 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 GRM6O15303 877 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 SOAT2O75908 522 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 ABCB4P21439 1286 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 PAX3P23760 479 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 SLC18A3Q16572 532 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 CLEC16AQ2KHT3 1053 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 FAM35AQ86V20 835 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 RNF168Q8IYW5 571 aaPredicted RBP11.29□□□□□ -0.6
SOX6-213ENST00000530378 CRYBG2Q8N1P7 616 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 TTC9BQ8N6N2 239 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 MYCBPAPQ8TBZ2 947 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 GDPD5Q8WTR4 605 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 ACBD6Q9BR61 282 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 TMEM30AQ9NV96 361 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 TRMT1Q9NXH9 659 aaKnown RBP11.29□□□□□ -0.6
SOX6-213ENST00000530378 TJP2Q9UDY2 1190 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 MSRAQ9UJ68 235 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 NAGPAQ9UK23 515 aa11.29□□□□□ -0.6
SOX6-213ENST00000530378 PATJQ8NI35 1801 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 MED7O43513 233 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 BEST1O76090 585 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 IPO7O95373 1038 aaKnown RBP11.28□□□□□ -0.6
SOX6-213ENST00000530378 BDNFP23560 247 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 OR1D2P34982 312 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 ERVFC1P60507 584 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 NOMO3P69849 1222 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 DSG1Q02413 1049 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 BMS1Q14692 1282 aaKnown RBP11.28□□□□□ -0.6
SOX6-213ENST00000530378 SPA17Q15506 151 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 PTPN14Q15678 1187 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 CYP4A22Q5TCH4 519 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 SDHAF4Q5VUM1 108 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 ALKBH5Q6P6C2 394 aaKnown RBP11.28□□□□□ -0.6
SOX6-213ENST00000530378 MMS22LQ6ZRQ5 1243 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 PAQR9Q6ZVX9 377 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 ANKS3Q6ZW76 656 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 TMC7Q7Z402 723 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 CCDC170Q8IYT3 715 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 ATAD1Q8NBU5 361 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 POF1BQ8WVV4 589 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 PIK3R5Q8WYR1 880 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 TGS1Q96RS0 853 aaKnown RBP11.28□□□□□ -0.6
SOX6-213ENST00000530378 PKMYT1Q99640 499 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 TCF25Q9BQ70 676 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 C11orf70Q9BRQ4 267 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 ZCWPW1Q9H0M4 648 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 ZBP1Q9H171 429 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 ST7Q9NRC1 585 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 CHST7Q9NS84 486 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
SOX6-213ENST00000530378 HESX1Q9UBX0 185 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 TRIM10Q9UDY6 481 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 RCCD1A6NED2 376 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 EPOPA6NHQ4 379 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 HIDE1A8MVS5 230 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 H7C4K7 107 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 RFXAPO00287 272 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 AP1G2O75843 785 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 CYP2F1P24903 491 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 IRS1P35568 1242 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 GPR15P49685 360 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 MAP3K7CLP57077 242 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 ROR1Q01973 937 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 PDE4CQ08493 712 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 IFRD2Q12894 506 aaPredicted RBP11.28□□□□□ -0.6
SOX6-213ENST00000530378 MRPL58Q14197 206 aaKnown RBP11.28□□□□□ -0.6
SOX6-213ENST00000530378 RAB30Q15771 203 aa11.28□□□□□ -0.6
SOX6-213ENST00000530378 CNGA2Q16280 664 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms