RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 DHX8Q14562 1220 aaKnown RBP5.6□□□□□ -1.51
C11orf88-204ENST00000529661 KIF22Q14807 665 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 ZNF169Q14929 603 aaPredicted RBP5.6□□□□□ -1.51
C11orf88-204ENST00000529661 PRR16Q569H4 304 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 MICALCLQ6ZW33 695 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 SKAP1Q86WV1 359 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 SIMC1Q8NDZ2 872 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 ACRBPQ8NEB7 543 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 DEPTORQ8TB45 409 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 SUCLG2Q96I99 432 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 SIK2Q9H0K1 926 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 SMOC2Q9H3U7 446 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.6□□□□□ -1.51
C11orf88-204ENST00000529661 PIH1D1Q9NWS0 290 aaKnown RBP5.6□□□□□ -1.51
C11orf88-204ENST00000529661 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.6□□□□□ -1.51
C11orf88-204ENST00000529661 TLK1Q9UKI8 766 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 ZDHHC8Q9ULC8 765 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 AGAP1Q9UPQ3 857 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 INSL6Q9Y581 213 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 F5H697 171 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 M0QYG6 137 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 TBX3O15119 743 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 SRGNP10124 158 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 PPP3CBP16298 524 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 SLC7A1P30825 629 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 FOLR3P41439 243 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 PTH2RP49190 550 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 SIM1P81133 766 aaPredicted RBP5.59□□□□□ -1.51
C11orf88-204ENST00000529661 BTKQ06187 659 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 HLXQ14774 488 aaPredicted RBP5.59□□□□□ -1.51
C11orf88-204ENST00000529661 TAF2Q6P1X5 1199 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 XRRA1Q6P2D8 792 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 VWA1Q6PCB0 445 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 USP37Q86T82 979 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 OR2C3Q8N628 320 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 B3GALNT2Q8NCR0 500 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 PSD4Q8NDX1 1056 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 MYCBPAPQ8TBZ2 947 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 BRIX1Q8TDN6 353 aaKnown RBP5.59□□□□□ -1.51
C11orf88-204ENST00000529661 KBTBD7Q8WVZ9 684 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 MSLNLQ96KJ4 702 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 RIPOR3Q96MK2 946 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 DUSP26Q9BV47 211 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 UNKQ9C0B0 810 aaKnown RBP5.59□□□□□ -1.51
C11orf88-204ENST00000529661 ZNF287Q9HBT7 754 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 PTPRHQ9HD43 1115 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 TRMT13Q9NUP7 481 aaKnown RBP5.59□□□□□ -1.51
C11orf88-204ENST00000529661 CPA4Q9UI42 421 aa5.59□□□□□ -1.51
C11orf88-204ENST00000529661 A0A0B4J269 797 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 E7ENX8 843 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 MGST3O14880 152 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 KPNA5O15131 536 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 CHRM2P08172 466 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 HDCP19113 662 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 EN2P19622 333 aaPredicted RBP5.58□□□□□ -1.52
C11orf88-204ENST00000529661 NDUFV1P49821 464 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 SUMO3P55854 103 aaPredicted RBP5.58□□□□□ -1.52
C11orf88-204ENST00000529661 TAP2Q03519 686 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 TUBB3Q13509 450 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 DGKKQ5KSL6 1271 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 KAZNQ674X7 775 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 C1orf228Q6PIY5 440 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 TMPRSS9Q7Z410 1059 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 SESTD1Q86VW0 696 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 FAM9AQ8IZU1 332 aaPredicted RBP5.58□□□□□ -1.52
C11orf88-204ENST00000529661 CELF5Q8N6W0 485 aaKnown RBP5.58□□□□□ -1.52
C11orf88-204ENST00000529661 CAGE1Q8TC20 777 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 POC1BQ8TC44 478 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 BRI3BPQ8WY22 251 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 TFAP2BQ92481 460 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 ZC3H10Q96K80 434 aaKnown RBP5.58□□□□□ -1.52
C11orf88-204ENST00000529661 DPH1Q9BZG8 443 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 STARD7Q9NQZ5 370 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 CNNM1Q9NRU3 951 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 ETAA1Q9NY74 926 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 CPNE7Q9UBL6 633 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 PADI4Q9UM07 663 aa5.58□□□□□ -1.52
C11orf88-204ENST00000529661 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.58□□□□□ -1.52
C11orf88-204ENST00000529661 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 IL18RAPO95256 599 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 ITGALP20701 1170 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 TNFSF4P23510 183 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 KCNJ5P48544 419 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 CHAF1AQ13111 956 aaPredicted RBP5.57□□□□□ -1.52
C11orf88-204ENST00000529661 GRAMD1BQ3KR37 738 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 FAM209BQ5JX69 171 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 IZUMO3Q5VZ72 239 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 ERAP2Q6P179 960 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 ADGRG3Q86Y34 549 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 DDX17Q92841 729 aaKnown RBP5.57□□□□□ -1.52
C11orf88-204ENST00000529661 NMD3Q96D46 503 aaKnown RBP5.57□□□□□ -1.52
C11orf88-204ENST00000529661 HEPHQ9BQS7 1158 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 SELENOOQ9BVL4 669 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 COLEC11Q9BWP8 271 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 TRIM54Q9BYV2 358 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 TPSD1Q9BZJ3 242 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 STK32BQ9NY57 414 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 FOXJ2Q9P0K8 574 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 OGDHLQ9ULD0 1010 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 CORO2BQ9UQ03 480 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms