RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 LRRC53A6NM62 1247 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 FOXN3O00409 490 aaPredicted RBP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ZNF197O14709 1029 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CYP26A1O43174 497 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 LILRB3O75022 631 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 MFAP3LO75121 409 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 LRRN2O75325 713 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 NOL4O94818 638 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 FBXO21O94952 628 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 PTMAP06454 111 aaKnown RBP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CNPP09543 421 aaKnown RBP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CSH1P0DML2 217 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CSH2P0DML3 217 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 GZMAP12544 262 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CYP11B1P15538 503 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 NPR3P17342 541 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 PFKLP17858 780 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ACO1P21399 889 aaKnown RBP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 TNFAIP3P21580 790 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CASP14P31944 242 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CYLC1P35663 651 aaPredicted RBP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 GRIK1P39086 918 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 PSEN1P49768 467 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ZNF132P52740 706 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 RAD23BP54727 409 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CDH8P55286 799 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ARPP19P56211 112 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ERVFC1P60507 584 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CDR2Q01850 454 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ITIH3Q06033 890 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ADCY1Q08828 1119 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CCDC173Q0VFZ6 552 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 MTA1Q13330 715 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ARID5BQ14865 1188 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 DUSP6Q16828 381 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 PUS10Q3MIT2 529 aaKnown RBP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 MGAT5BQ3V5L5 792 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 MDH1BQ5I0G3 518 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 TMEM184AQ6ZMB5 413 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ACOT1Q86TX2 421 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 TMTC1Q8IUR5 882 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CCDC170Q8IYT3 715 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 EFHBQ8N7U6 833 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 UBR7Q8N806 425 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 SLC4A11Q8NBS3 891 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 STKLD1Q8NE28 680 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CMASQ8NFW8 434 aaPredicted RBP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 GDPD5Q8WTR4 605 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 BCL7CQ8WUZ0 217 aaPredicted RBP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CPLX3Q8WVH0 158 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ZNF606Q8WXB4 792 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 HSFY1Q96LI6 401 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 C8orf48Q96LL4 319 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CCDC42Q96M95 316 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ZNF512Q96ME7 567 aaPredicted RBP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 KREMEN1Q96MU8 473 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 NECTIN4Q96NY8 510 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CLSTN3Q9BQT9 956 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 DUSP16Q9BY84 665 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 TTYH3Q9C0H2 523 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 SYNCQ9H7C4 482 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CERS4Q9HA82 394 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CYP4F11Q9HBI6 524 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 ABI2Q9NYB9 513 aaPredicted RBP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 WDR35Q9P2L0 1181 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 HCSTQ9UBK5 93 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 CACNG4Q9UBN1 327 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 FBXW11Q9UKB1 542 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 GTF3C4Q9UKN8 822 aa8.4□□□□□ -1.06
SSBP3-211ENST00000528787 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 TIMM13Q9Y5L4 95 aaPredicted RBP8.4□□□□□ -1.06
SSBP3-211ENST00000528787 COL4A4P53420 1690 aaPredicted RBP8.4□□□□□ -1.07
SSBP3-211ENST00000528787 PTPRDP23468 1912 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 WDR27A2RRH5 827 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 MTMR11A4FU01 709 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 ANKRD62A6NC57 917 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 M0QYV0 167 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 XPO1O14980 1071 aaKnown RBP8.39□□□□□ -1.07
SSBP3-211ENST00000528787 TGM5O43548 720 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 AKR1B10O60218 316 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 GYPCP04921 128 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 MYBL1P10243 752 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 FOSL2P15408 326 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 IGFBP4P22692 258 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 LMO2P25791 158 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 NSFP46459 744 aaKnown RBP8.39□□□□□ -1.07
SSBP3-211ENST00000528787 RAP1GAPP47736 663 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 CLCN4P51793 760 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 SPA17Q15506 151 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 AAK1Q2M2I8 961 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 ZNF394Q53GI3 561 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 CYP4A22Q5TCH4 519 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 PRSS55Q6UWB4 352 aaPredicted RBP8.39□□□□□ -1.07
SSBP3-211ENST00000528787 SIX6OS1Q8N1H7 587 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 SCML4Q8N228 414 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 DEFB123Q8N688 67 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 KREMEN2Q8NCW0 462 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 C1orf131Q8NDD1 294 aaKnown RBP8.39□□□□□ -1.07
SSBP3-211ENST00000528787 SLC2A14Q8TDB8 520 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 EPS8L1Q8TE68 723 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms