RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 HIF1AQ16665 826 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 TRIM72Q6ZMU5 477 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 GADL1Q6ZQY3 521 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 BRSK2Q8IWQ3 736 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 FBXO36Q8NEA4 188 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 PYROXD1Q8WU10 500 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 RSAD2Q8WXG1 361 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 MYCBPQ99417 103 aaPredicted RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 NIF3L1Q9GZT8 377 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 PRKAG3Q9UGI9 489 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 LGALS13Q9UHV8 139 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 MCM8Q9UJA3 840 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 CHKBQ9Y259 395 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 NR2E3Q9Y5X4 410 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 NFASCO94856 1347 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 SKAP2O75563 359 aaPredicted RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 ASMTLO95671 621 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 NFICP08651 508 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 RGS7P49802 495 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 RTP1P59025 263 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 OASLQ15646 514 aaKnown RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 DUOXA2Q1HG44 320 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 C15orf59Q2T9L4 293 aaPredicted RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 MOB2Q70IA6 237 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 KCTD6Q8NC69 237 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 LRRC8CQ8TDW0 803 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 CPT1BQ92523 772 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 CPB2Q96IY4 423 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 CDHR1Q96JP9 859 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 LPIN3Q9BQK8 851 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 MAGEB5Q9BZ81 275 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 RXFP1Q9HBX9 757 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 EURLQ9NYK6 297 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 LDHAP00338 332 aaKnown RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 CALB1P05937 261 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 IQCF3P0C7M6 154 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 MSH2P43246 934 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 ASPAP45381 313 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 ZNF132P52740 706 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 ZNF280AP59817 542 aaPredicted RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 ATP11AP98196 1134 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 NEDD9Q14511 834 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 DCAF15Q66K64 600 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 XRRA1Q6P2D8 792 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 SCYL2Q6P3W7 929 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 CENPUQ71F23 418 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 P3H4Q92791 437 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 UTP4Q969X6 686 aaKnown RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 PRR11Q96HE9 360 aaPredicted RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 ACO2Q99798 780 aaKnown RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 UBN1Q9NPG3 1134 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 NRBP2Q9NSY0 501 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 TCRBV5S1A1TA0A578 114 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 H0YCG3 227 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 GSTA1P08263 222 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 HOXC6P09630 235 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 CLNS1AP54105 237 aaKnown RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 SPARCL1Q14515 664 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 NAA25Q14CX7 972 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 ZNF772Q68DY9 489 aaPredicted RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 PPP1R21Q6ZMI0 780 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 FBXO16Q8IX29 292 aaPredicted RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 PALM2Q8IXS6 379 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 BBOF1Q8ND07 529 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 RFWD2Q8NHY2 731 aa7.83□□□□□ -1.16
C11orf54-207ENST00000528288 MRPL4Q9BYD3 311 aaKnown RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 NKX1-2Q9UD57 310 aaPredicted RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 XPO7Q9UIA9 1087 aaKnown RBP7.83□□□□□ -1.16
C11orf54-207ENST00000528288 A0A0G2JND7 137 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 C3orf70A6NLC5 250 aaPredicted RBP7.82□□□□□ -1.16
C11orf54-207ENST00000528288 FAM189A1O60320 539 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 TOM1L1O75674 476 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 ITGB3P05106 788 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 NEFHP12036 1026 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 GSCP56915 257 aaPredicted RBP7.82□□□□□ -1.16
C11orf54-207ENST00000528288 MCCD1P59942 119 aaPredicted RBP7.82□□□□□ -1.16
C11orf54-207ENST00000528288 SEPT7Q16181 437 aaKnown RBP7.82□□□□□ -1.16
C11orf54-207ENST00000528288 PLEKHG4Q58EX7 1191 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 OTOAQ7RTW8 1153 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 LRRC6Q86X45 466 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 C12orf29Q8N999 325 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 TCP10LQ8TDR4 215 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 PTPRN2Q92932 1015 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 CFAP36Q96G28 342 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 VCPIP1Q96JH7 1222 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 PAFAH2Q99487 392 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 CXCL16Q9H2A7 254 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 PDGFCQ9NRA1 345 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 HOXC10Q9NYD6 342 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 GINS2Q9Y248 185 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 M0QYV0 167 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 NOP56O00567 594 aaKnown RBP7.82□□□□□ -1.16
C11orf54-207ENST00000528288 MIPP30301 263 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 ELF1P32519 619 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 EIF3EP60228 445 aaKnown RBP7.82□□□□□ -1.16
C11orf54-207ENST00000528288 WLSQ5T9L3 541 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 RFX8Q6ZV50 586 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 UBR7Q8N806 425 aa7.82□□□□□ -1.16
C11orf54-207ENST00000528288 DENND1AQ8TEH3 1009 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms