RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	ZNF473	Q8WTR7	871 aa	Known RBP	10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	PPM1E	Q8WY54	764 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	ZBTB9	Q96C00	473 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	HPDL	Q96IR7	371 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	CFAP57	Q96MR6	1250 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	FDXACB1	Q9BRP7	624 aa	Predicted RBP	10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	SYNC	Q9H7C4	482 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	ASNSD1	Q9NWL6	643 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	SAGE1	Q9NXZ1	904 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	LGALS13	Q9UHV8	139 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216	EVPL	Q92817	2033 aa		10.76	□□□□□ -0.69
PGAP2-231	ENST00000528216		E7EVH7	732 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	DNALI1	O14645	258 aa	Predicted RBP	10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	TP73	O15350	636 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	TSPAN1	O60635	241 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	SHBG	P04278	402 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	ITGB3	P05106	788 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	NFIC	P08651	508 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	TSHR	P16473	764 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	ATF7	P17544	494 aa	Predicted RBP	10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	ZNF252P-AS1	Q0IIN9	211 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	GRIK4	Q16099	956 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	SLC10A6	Q3KNW5	377 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	PTPN20	Q4JDL3	420 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	ZFYVE27	Q5T4F4	411 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	IZUMO3	Q5VZ72	239 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	DENND1B	Q6P3S1	775 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	LCLAT1	Q6UWP7	414 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	MFSD7	Q6UXD7	560 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	BBS12	Q6ZW61	710 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	PLEKHH3	Q7Z736	793 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	DPP9	Q86TI2	863 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	ZDHHC17	Q8IUH5	632 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	NLRP7	Q8WX94	980 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	ATG4A	Q8WYN0	398 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	USP6NL	Q92738	828 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	XPO6	Q96QU8	1125 aa	Known RBP	10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	NT5C1A	Q9BXI3	368 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	HEMGN	Q9BXL5	484 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	NSRP1	Q9H0G5	558 aa	Known RBP	10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	CYLD	Q9NQC7	956 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	AAAS	Q9NRG9	546 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	FETUB	Q9UGM5	382 aa		10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	R3HDM2	Q9Y2K5	976 aa	Known RBP	10.75	□□□□□ -0.69
PGAP2-231	ENST00000528216	ZNF487	B1APH4	448 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216		O00370	1275 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	XPOT	O43592	962 aa	Known RBP	10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	CDH16	O75309	829 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	SNAI1	O95863	264 aa	Predicted RBP	10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	ERBB2	P04626	1255 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	MMP3	P08254	477 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	FGFR4	P22455	802 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	SCNN1A	P37088	669 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	IGBP1	P78318	339 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	SLC25A11	Q02978	314 aa	Known RBP	10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	AUH	Q13825	339 aa	Known RBP	10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	OASL	Q15646	514 aa	Known RBP	10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	LLGL2	Q6P1M3	1020 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	FOXR1	Q6PIV2	292 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	SCARA5	Q6ZMJ2	495 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	UNC93A	Q86WB7	457 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	CCDC25	Q86WR0	208 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	XYLT1	Q86Y38	959 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	TDRP	Q86YL5	185 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	CEP120	Q8N960	986 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	SLC35B2	Q8TB61	432 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	STK32A	Q8WU08	396 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	HERPUD2	Q9BSE4	406 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	TINF2	Q9BSI4	451 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	CNPY3	Q9BT09	278 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	RSAD1	Q9HA92	442 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	UBN1	Q9NPG3	1134 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	DPP3	Q9NY33	737 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	SENP1	Q9P0U3	644 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	TPX2	Q9ULW0	747 aa	Known RBP	10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	POLI	Q9UNA4	740 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	ZNF148	Q9UQR1	794 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	FAM169A	Q9Y6X4	670 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	NRCAM	Q92823	1304 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	CIT	O14578	2027 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	SMIM35	A0A1B0GVV1	85 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	TLDC2	A0PJX2	215 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	LRRD1	A4D1F6	860 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216		F8VP50	259 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	MEFV	O15553	781 aa	Predicted RBP	10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	MICAL2	O94851	1124 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	FAM163B	P0C2L3	166 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	IQCF3	P0C7M6	154 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	ZNF143	P52747	638 aa	Predicted RBP	10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	YARS	P54577	528 aa	Known RBP	10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	OSTN	P61366	133 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	CBLB	Q13191	982 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	ACVR2B	Q13705	512 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	TFDP2	Q14188	446 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	ZNF394	Q53GI3	561 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	C2CD6	Q53TS8	623 aa		10.74	□□□□□ -0.69
PGAP2-231	ENST00000528216	FAM47C	Q5HY64	1035 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms