RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SIT1Q9Y3P8 196 aa35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 KANSL1LA0AUZ9 987 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 SOBPA7XYQ1 873 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 HEPACAM2A8MVW5 462 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 ATP2C2O75185 946 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 NOL4O94818 638 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 GPR15P49685 360 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 PSMC1P62191 440 aaKnown RBP35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 DLG4P78352 724 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 ZNF699Q32M78 642 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 EDRF1Q3B7T1 1238 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 INTS8Q75QN2 995 aaKnown RBP35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 DTWD2Q8NBA8 298 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 MYCBPAPQ8TBZ2 947 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 MYLPFQ96A32 169 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 MYRFLQ96LU7 910 aa35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 HOOK1Q9UJC3 728 aaKnown RBP35.31■■■■□ 3.24
SSSCA1-205ENST00000527920 AKAP3O75969 853 aa35.3■■■■□ 3.24
SSSCA1-205ENST00000527920 VNN1O95497 513 aa35.3■■■■□ 3.24
SSSCA1-205ENST00000527920 DDX6P26196 483 aaKnown RBP eCLIP35.3■■■■□ 3.24
SSSCA1-205ENST00000527920 NLRP12P59046 1061 aa35.3■■■■□ 3.24
SSSCA1-205ENST00000527920 DDR2Q16832 855 aa35.3■■■■□ 3.24
SSSCA1-205ENST00000527920 TMEM150AQ86TG1 271 aa35.3■■■■□ 3.24
SSSCA1-205ENST00000527920 ELOA2Q8IYF1 753 aaPredicted RBP35.3■■■■□ 3.24
SSSCA1-205ENST00000527920 TAF4BQ92750 862 aa35.3■■■■□ 3.24
SSSCA1-205ENST00000527920 MAGEC2Q9UBF1 373 aaPredicted RBP35.3■■■■□ 3.24
SSSCA1-205ENST00000527920 NXF1Q9UBU9 619 aaKnown RBP35.3■■■■□ 3.24
SSSCA1-205ENST00000527920 NCANO14594 1321 aa35.3■■■■□ 3.24
SSSCA1-205ENST00000527920 SMC2O95347 1197 aa35.29■■■■□ 3.24
SSSCA1-205ENST00000527920 F11P03951 625 aa35.29■■■■□ 3.24
SSSCA1-205ENST00000527920 PDGFRBP09619 1106 aa35.29■■■■□ 3.24
SSSCA1-205ENST00000527920 MCCD1P59942 119 aaPredicted RBP35.29■■■■□ 3.24
SSSCA1-205ENST00000527920 FCHO2Q0JRZ9 810 aa35.29■■■■□ 3.24
SSSCA1-205ENST00000527920 ZNF667Q5HYK9 610 aa35.29■■■■□ 3.24
SSSCA1-205ENST00000527920 OR6B3Q8NGW1 331 aa35.29■■■■□ 3.24
SSSCA1-205ENST00000527920 DLGAP2Q9P1A6 1054 aa35.29■■■■□ 3.24
SSSCA1-205ENST00000527920 GDI1P31150 447 aa35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 PSMC2P35998 433 aaKnown RBP35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 VAMP7P51809 220 aa35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 CYP4F8P98187 520 aa35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 SGSM1Q2NKQ1 1148 aa35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 C1orf220Q5T0J3 134 aa35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 SV2AQ7L0J3 742 aa35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 RSPRY1Q96DX4 576 aa35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 PCED1BQ96HM7 432 aa35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 SPATA17Q96L03 361 aa35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 FOXQ1Q9C009 403 aa35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 NME7Q9Y5B8 376 aa35.28■■■■□ 3.24
SSSCA1-205ENST00000527920 ZNF263O14978 683 aa35.27■■■■□ 3.24
SSSCA1-205ENST00000527920 ADAM9Q13443 819 aa35.27■■■■□ 3.24
SSSCA1-205ENST00000527920 ZNF658Q5TYW1 1059 aaPredicted RBP35.27■■■■□ 3.24
SSSCA1-205ENST00000527920 SDHAF4Q5VUM1 108 aa35.27■■■■□ 3.24
SSSCA1-205ENST00000527920 FAM186BQ8IYM0 893 aa35.27■■■■□ 3.24
SSSCA1-205ENST00000527920 NELL2Q99435 816 aa35.27■■■■□ 3.24
SSSCA1-205ENST00000527920 SLC38A8A6NNN8 435 aa35.26■■■■□ 3.24
SSSCA1-205ENST00000527920 ARNTLO00327 626 aa35.26■■■■□ 3.24
SSSCA1-205ENST00000527920 CHADO15335 359 aa35.26■■■■□ 3.24
SSSCA1-205ENST00000527920 P4HA1P13674 534 aa35.26■■■■□ 3.24
SSSCA1-205ENST00000527920 TPRG1Q6ZUI0 275 aa35.26■■■■□ 3.24
SSSCA1-205ENST00000527920 SLC46A2Q9BY10 475 aa35.26■■■■□ 3.24
SSSCA1-205ENST00000527920 HEBP1Q9NRV9 189 aa35.26■■■■□ 3.24
SSSCA1-205ENST00000527920 A8MXQ7 604 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 H0Y858 1186 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 DPYSL4O14531 572 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 KRT13P13646 458 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 GLULP15104 373 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 PTPN1P18031 435 aaKnown RBP35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 MLLT6P55198 1093 aaPredicted RBP35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 MDH1BQ5I0G3 518 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 ZNF852Q6ZMS4 543 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 SCN4BQ8IWT1 228 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 YAF2Q8IY57 180 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 SMYD4Q8IYR2 804 aaPredicted RBP35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 CMTM8Q8IZV2 173 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 B3GALNT2Q8NCR0 500 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 MRPS31Q92665 395 aaKnown RBP35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 SMARCE1Q969G3 411 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 SMYD3Q9H7B4 428 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 LTB4R2Q9NPC1 389 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 MAGED2Q9UNF1 606 aaPredicted RBP35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 MRPS17Q9Y2R5 130 aaKnown RBP35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 PCDHA5Q9Y5H7 936 aa35.25■■■■□ 3.23
SSSCA1-205ENST00000527920 ASS1P00966 412 aaKnown RBP35.24■■■■□ 3.23
SSSCA1-205ENST00000527920 BDNFP23560 247 aa35.24■■■■□ 3.23
SSSCA1-205ENST00000527920 CYP27A1Q02318 531 aa35.24■■■■□ 3.23
SSSCA1-205ENST00000527920 NUP210Q8TEM1 1887 aaPredicted RBP35.24■■■■□ 3.23
SSSCA1-205ENST00000527920 F5P12259 2224 aa35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 MAN2B1O00754 1011 aa35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 TRIM66O15016 1216 aa35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 PRAMEF12O95522 483 aa35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 DCNP07585 359 aaKnown RBP35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 PRCPP42785 496 aa35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 MAGEA9P43362 315 aa35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 MON1AQ86VX9 555 aa35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 STKLD1Q8NE28 680 aa35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 ATOH1Q92858 354 aaPredicted RBP35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 C8orf48Q96LL4 319 aa35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 ELOVL4Q9GZR5 314 aa35.23■■■■□ 3.23
SSSCA1-205ENST00000527920 TADA3O75528 432 aa35.22■■■■□ 3.23
SSSCA1-205ENST00000527920 GTF2H1P32780 548 aa35.22■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms