RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 CWC15Q9P013 229 aaKnown RBP4.47□□□□□ -1.69
CHD7-205ENST00000527825 IMPACTQ9P2X3 320 aa4.47□□□□□ -1.69
CHD7-205ENST00000527825 ORC3Q9UBD5 711 aaPredicted RBP4.47□□□□□ -1.69
CHD7-205ENST00000527825 SLC9A2Q9UBY0 812 aa4.47□□□□□ -1.69
CHD7-205ENST00000527825 LIMCH1Q9UPQ0 1083 aa4.47□□□□□ -1.69
CHD7-205ENST00000527825 PRG3Q9Y2Y8 225 aaPredicted RBP4.47□□□□□ -1.69
CHD7-205ENST00000527825 SNX14Q9Y5W7 946 aa4.47□□□□□ -1.69
CHD7-205ENST00000527825 ACACAQ13085 2346 aa4.47□□□□□ -1.69
CHD7-205ENST00000527825 ARID2Q68CP9 1835 aa4.46□□□□□ -1.69
CHD7-205ENST00000527825 CCDC194A0A1B0GVG4 234 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 ERICH4A6NGS2 130 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 SLC38A8A6NNN8 435 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 PATE3B3GLJ2 98 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 PDE2AO00408 941 aaPredicted RBP4.46□□□□□ -1.7
CHD7-205ENST00000527825 ZBTB5O15062 677 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 RRP8O43159 456 aaKnown RBP4.46□□□□□ -1.7
CHD7-205ENST00000527825 EXTL3O43909 919 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 ATP9AO75110 1047 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 GPR32O75388 356 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 PAPLNO95428 1278 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 LARGE1O95461 756 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 TPM1P09493 284 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 KCNA2P16389 499 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 ENGP17813 658 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 PSMC3P17980 439 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 LIG1P18858 919 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 FGFR4P22455 802 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 CDC27P30260 824 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 HOXA9P31269 272 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 CSRP3P50461 194 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 RAB27AP51159 221 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 DGKEP52429 567 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 DSG1Q02413 1049 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 CYP4F3Q08477 520 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 SEMA3BQ13214 749 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 GPS2Q13227 327 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 LRP8Q14114 963 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 SETDB1Q15047 1291 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 TRIP6Q15654 476 aaKnown RBP4.46□□□□□ -1.7
CHD7-205ENST00000527825 USP41Q3LFD5 358 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 CCDC178Q5BJE1 867 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 COLEC12Q5KU26 742 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 VPS53Q5VIR6 699 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 PEAR1Q5VY43 1037 aaPredicted RBP4.46□□□□□ -1.7
CHD7-205ENST00000527825 PDXDC1Q6P996 788 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 SYT10Q6XYQ8 523 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 AGMOQ6ZNB7 445 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 TAS1R1Q7RTX1 841 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 GPR155Q7Z3F1 870 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 IQCA1Q86XH1 822 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 ZNF280BQ86YH2 543 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 CAMKK1Q8N5S9 505 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 PNPLA1Q8N8W4 532 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 SLC7A14Q8TBB6 771 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 DEPDC1BQ8WUY9 529 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 ADAMTS14Q8WXS8 1223 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 ZKSCAN3Q9BRR0 538 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 COLEC11Q9BWP8 271 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 RBCK1Q9BYM8 510 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 SCAND2PQ9GZW5 306 aaPredicted RBP4.46□□□□□ -1.7
CHD7-205ENST00000527825 ADAM19Q9H013 955 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 IL25Q9H293 177 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 TRPV5Q9NQA5 729 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 CHST12Q9NRB3 414 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 ARGLU1Q9NWB6 273 aaPredicted RBP4.46□□□□□ -1.7
CHD7-205ENST00000527825 HCFC1R1Q9NWW0 138 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 FNIP2Q9P278 1114 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 DKK4Q9UBT3 224 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 DNAI1Q9UI46 699 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 SMC3Q9UQE7 1217 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.46□□□□□ -1.71e-9■□□□□ 8.1
CHD7-205ENST00000527825 HEMK1Q9Y5R4 338 aaPredicted RBP4.46□□□□□ -1.7
CHD7-205ENST00000527825 LAMA1P25391 3075 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 COL5A1P20908 1838 aaPredicted RBP4.46□□□□□ -1.7
CHD7-205ENST00000527825 PIEZO2Q9H5I5 2752 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 USP9XQ93008 2570 aaPredicted RBP4.46□□□□□ -1.7
CHD7-205ENST00000527825 FRMPD4Q14CM0 1322 aa4.46□□□□□ -1.7
CHD7-205ENST00000527825 HECTD1Q9ULT8 2610 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 ZMYM2Q9UBW7 1377 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 CCDC69A6NI79 296 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 EFCAB8A8MWE9 144 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 UPK3BL1B0FP48 263 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 B8ZZF3 427 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 UPK3BL2E5RIL1 263 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 SPECC1L-ADORA2AF8WAN1 911 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 LINC01387J3KSC0 135 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 ZNF197O14709 1029 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 DCLK1O15075 740 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 MEFVO15553 781 aaPredicted RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 CCP110O43303 1012 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 RAB11FIP3O75154 756 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 DDHD2O94830 711 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 POMCP01189 267 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 CFIP05156 583 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 IVLP07476 585 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 RHOP08100 348 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 FTH1P19P0C7X4 201 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 RPL17P18621 184 aaKnown RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 PDCP20941 246 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 EPHA1P21709 976 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms