RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PCDH9Q9HC56 1237 aa18.5■□□□□ 0.55
USH1C-205ENST00000527020 METTL5Q9NRN9 209 aaKnown RBP18.5■□□□□ 0.55
USH1C-205ENST00000527020 A0A087WZ62 844 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 H0YHG0 523 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 CILPO75339 1184 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 GHRP10912 638 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 PTPN11Q06124 597 aaPredicted RBP18.49■□□□□ 0.55
USH1C-205ENST00000527020 MORF4L2Q15014 288 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 CEP128Q6ZU80 1094 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 CKAP2Q8WWK9 683 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 FAXDC2Q96IV6 333 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 FDXACB1Q9BRP7 624 aaPredicted RBP18.49■□□□□ 0.55
USH1C-205ENST00000527020 KCNK9Q9NPC2 374 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 EFR3BQ9Y2G0 817 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.49■□□□□ 0.55
USH1C-205ENST00000527020 PLXNB2O15031 1838 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 TCP11X1B4DZS4 312 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 MICAL2O94851 1124 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 LGALS2P05162 132 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 CD48P09326 243 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 MCF2P10911 925 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 PHKA2P46019 1235 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 POU5F1BQ06416 359 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 SLC10A6Q3KNW5 377 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 MAMDC4Q6UXC1 1216 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 ARMCX2Q7L311 632 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 IFNLR1Q8IU57 520 aaPredicted RBP18.49■□□□□ 0.55
USH1C-205ENST00000527020 SRRM1Q8IYB3 904 aaKnown RBP18.49■□□□□ 0.55
USH1C-205ENST00000527020 ACTL9Q8TC94 416 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 PRCCQ92733 491 aaPredicted RBP18.49■□□□□ 0.55
USH1C-205ENST00000527020 CPB2Q96IY4 423 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 CCDC77Q9BR77 488 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 C10orf88Q9H8K7 445 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 VRTNQ9H8Y1 702 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 EFCC1Q9HA90 598 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 SAMD15Q9P1V8 674 aa18.49■□□□□ 0.55
USH1C-205ENST00000527020 SGK1O00141 431 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 SNX3O60493 162 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 RASSF9O75901 435 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 OSBPP22059 807 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 KDELR1P24390 212 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 GDF10P55107 478 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 DYNLT1P63172 113 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 OTUD4Q01804 1114 aaKnown RBP18.48■□□□□ 0.55
USH1C-205ENST00000527020 ZNF484Q5JVG2 852 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 HP1BP3Q5SSJ5 553 aaPredicted RBP18.48■□□□□ 0.55
USH1C-205ENST00000527020 TAPT1Q6NXT6 567 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 BBS12Q6ZW61 710 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 ANKS4BQ8N8V4 417 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 DYDC1Q8WWB3 177 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 CFAP57Q96MR6 1250 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 FGFR1OP2Q9NVK5 253 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.48■□□□□ 0.55
USH1C-205ENST00000527020 SHOC2Q9UQ13 582 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 FARP1Q9Y4F1 1045 aaPredicted RBP18.48■□□□□ 0.55
USH1C-205ENST00000527020 ACTL7BQ9Y614 415 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 LOC102724159A0A0B4J2E5 919 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 CST8O60676 142 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 KRT7P08729 469 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 GJA5P36382 358 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 GABRB2P47870 512 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 ZNF268Q14587 947 aaPredicted RBP18.48■□□□□ 0.55
USH1C-205ENST00000527020 PWP2Q15269 919 aaKnown RBP18.48■□□□□ 0.55
USH1C-205ENST00000527020 TAF5Q15542 800 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 MCRS1Q96EZ8 462 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 TMEM176AQ96HP8 235 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 NSRP1Q9H0G5 558 aaKnown RBP18.48■□□□□ 0.55
USH1C-205ENST00000527020 WDR35Q9P2L0 1181 aa18.48■□□□□ 0.55
USH1C-205ENST00000527020 ASB14A6NK59 587 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 ALOX15BO15296 676 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 ATP2C2O75185 946 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 IFNB1P01574 187 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 ARF4P18085 180 aaPredicted RBP18.47■□□□□ 0.55
USH1C-205ENST00000527020 GPD2P43304 727 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 PLCB3Q01970 1234 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 GAD2Q05329 585 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 TTLL12Q14166 644 aaPredicted RBP18.47■□□□□ 0.55
USH1C-205ENST00000527020 TMED2Q15363 201 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 ILDR2Q71H61 639 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 RIBC1Q8N443 379 aaPredicted RBP18.47■□□□□ 0.55
USH1C-205ENST00000527020 GDAP1Q8TB36 358 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 TTC25Q96NG3 672 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 SLC40A1Q9NP59 571 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 EXOC1LA0A1B0GW35 172 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 BANF1O75531 89 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 VTNP04004 478 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 CYP3A5P20815 502 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 TNFAIP2Q03169 654 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 MAP1SQ66K74 1059 aaPredicted RBP18.47■□□□□ 0.55
USH1C-205ENST00000527020 FASTKD5Q7L8L6 764 aaKnown RBP18.47■□□□□ 0.55
USH1C-205ENST00000527020 TDRPQ86YL5 185 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 ASB7Q9H672 318 aa18.47■□□□□ 0.55
USH1C-205ENST00000527020 M0QYV0 167 aa18.46■□□□□ 0.55
USH1C-205ENST00000527020 MIPP30301 263 aa18.46■□□□□ 0.55
USH1C-205ENST00000527020 ATICP31939 592 aa18.46■□□□□ 0.55
USH1C-205ENST00000527020 ADCY1Q08828 1119 aa18.46■□□□□ 0.55
USH1C-205ENST00000527020 HADHQ16836 314 aaKnown RBP18.46■□□□□ 0.55
USH1C-205ENST00000527020 ANKRD22Q5VYY1 191 aa18.46■□□□□ 0.55
USH1C-205ENST00000527020 TRABD2AQ86V40 505 aa18.46■□□□□ 0.55
USH1C-205ENST00000527020 TAX1BP1Q86VP1 789 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms