RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 NSUN3Q9H649 340 aaKnown RBP14.58□□□□□ -0.08
CD44-224ENST00000526669 CNTN6Q9UQ52 1028 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 LUC7L2Q9Y383 392 aaKnown RBP14.58□□□□□ -0.08
CD44-224ENST00000526669 MTCH2Q9Y6C9 303 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 TGM5O43548 720 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 SOAT2O75908 522 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 SEC24AO95486 1093 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 GLUD1P00367 558 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 PAEPP09466 180 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 VDRP11473 427 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 BDNFP23560 247 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 KRT9P35527 623 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 ZBED6P86452 979 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 GPR17Q13304 367 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 RAB33AQ14088 237 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 DUSP6Q16828 381 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 GOLGA7BQ2TAP0 167 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 SFMBT2Q5VUG0 894 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 FAM35AQ86V20 835 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 DEFB123Q8N688 67 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 SLC20A1Q8WUM9 679 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 CYFIP2Q96F07 1278 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 GUCD1Q96NT3 240 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 OXCT2Q9BYC2 517 aaPredicted RBP14.57□□□□□ -0.08
CD44-224ENST00000526669 EDEM3Q9BZQ6 932 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 ZNF518BQ9C0D4 1074 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 FAM124BQ9H5Z6 455 aaPredicted RBP14.57□□□□□ -0.08
CD44-224ENST00000526669 SLC27A5Q9Y2P5 690 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 PCDHB5Q9Y5E4 795 aa14.57□□□□□ -0.08
CD44-224ENST00000526669 MFAP3LO75121 409 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 ABLIM3O94929 683 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 CFHP08603 1231 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 SKILP12757 684 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 CYP2F1P24903 491 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 GPR15P49685 360 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 PDE6CP51160 858 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 CLCN4P51793 760 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 CACNA2D1P54289 1103 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 PTK2Q05397 1052 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 HYAL1Q12794 435 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 DUSP4Q13115 394 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 SDHAF4Q5VUM1 108 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 C4orf50Q6ZRC1 276 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 PAQR9Q6ZVX9 377 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.56□□□□□ -0.08
CD44-224ENST00000526669 NOP9Q86U38 636 aaKnown RBP14.56□□□□□ -0.08
CD44-224ENST00000526669 FUKQ8N0W3 1084 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 STKLD1Q8NE28 680 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 ZNF397Q8NF99 534 aaPredicted RBP14.56□□□□□ -0.08
CD44-224ENST00000526669 IQCDQ96DY2 449 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 CDX2Q99626 313 aaPredicted RBP14.56□□□□□ -0.08
CD44-224ENST00000526669 SEPT5Q99719 369 aaPredicted RBP14.56□□□□□ -0.08
CD44-224ENST00000526669 DNAI2Q9GZS0 605 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 CYP4F11Q9HBI6 524 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 MAN1C1Q9NR34 630 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 KRT82Q9NSB4 513 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 AFF4Q9UHB7 1163 aaKnown RBP14.56□□□□□ -0.08
CD44-224ENST00000526669 TSPAN16Q9UKR8 245 aa14.56□□□□□ -0.08
CD44-224ENST00000526669 DOCK8Q8NF50 2099 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 AKR1B15C9JRZ8 316 aaPredicted RBP14.55□□□□□ -0.08
CD44-224ENST00000526669 M0QYV0 167 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 O00370 1275 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 LINC01565O15544 149 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 AP1G2O75843 785 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 MICAL2O94851 1124 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 FERP16591 822 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 ELF1P32519 619 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 MAPRE1Q15691 268 aaKnown RBP14.55□□□□□ -0.08
CD44-224ENST00000526669 NFE2Q16621 373 aaPredicted RBP14.55□□□□□ -0.08
CD44-224ENST00000526669 MGAT5BQ3V5L5 792 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 TPGS2Q68CL5 300 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 PASD1Q8IV76 773 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 SCN4BQ8IWT1 228 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 KREMEN2Q8NCW0 462 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 VN1R2Q8NFZ6 395 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 ZNF461Q8TAF7 563 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 UBA3Q8TBC4 463 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 EPS8L1Q8TE68 723 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 SLC22A17Q8WUG5 538 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 ZNF606Q8WXB4 792 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 PPP2R3CQ969Q6 453 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 TMEM30AQ9NV96 361 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 LMCD1Q9NZU5 365 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 FBXW11Q9UKB1 542 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 MYO6Q9UM54 1294 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 HCFC2Q9Y5Z7 792 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 ATP8B3O60423 1300 aa14.55□□□□□ -0.08
CD44-224ENST00000526669 HELZP42694 1942 aaKnown RBP14.54□□□□□ -0.08
CD44-224ENST00000526669 SPDYE4A6NLX3 237 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 PRRG1O14668 218 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 BEST1O76090 585 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 MMEP08473 750 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 PLEKP08567 350 aaPredicted RBP14.54□□□□□ -0.08
CD44-224ENST00000526669 FAM200BP0CF97 657 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 ATF2P15336 505 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 CYP11B1P15538 503 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 BPIFB4P59827 614 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 ARID5BQ14865 1188 aa14.54□□□□□ -0.08
CD44-224ENST00000526669 CCDC85BQ15834 202 aaPredicted RBP14.54□□□□□ -0.08
CD44-224ENST00000526669 TDRD12Q587J7 1177 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms