RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 EGFP01133 1207 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 USP17L7P0C7H9 530 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 ARSAP15289 507 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 GAP43P17677 238 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 CYP2F1P24903 491 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 GJA4P35212 333 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 GPR15P49685 360 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 MYL7Q01449 175 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 FAM160A1Q05DH4 1040 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 KCNA1Q09470 495 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 SF3A2Q15428 464 aaKnown RBP11.48□□□□□ -0.57
VPS26B-203ENST00000525918 DDR2Q16832 855 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 INTS6LQ5JSJ4 861 aaKnown RBP11.48□□□□□ -0.57
VPS26B-203ENST00000525918 L1TD1Q5T7N2 865 aaKnown RBP11.48□□□□□ -0.57
VPS26B-203ENST00000525918 SDHAF4Q5VUM1 108 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 USP49Q70CQ1 688 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 SV2BQ7L1I2 683 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 BRSK2Q8IWQ3 736 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 CPA6Q8N4T0 437 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 CSGALNACT2Q8N6G5 542 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 LRRC52Q8N7C0 313 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 C1orf127Q8N9H9 656 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 FSIP1Q8NA03 581 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 SPATA18Q8TC71 538 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 OSCP1Q8WVF1 389 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 CHAMP1Q96JM3 812 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 ACCSQ96QU6 501 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 ECT2Q9H8V3 914 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 FBRSL1Q9HCM7 1045 aaKnown RBP11.48□□□□□ -0.57
VPS26B-203ENST00000525918 GDAP2Q9NXN4 497 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 GTF3C4Q9UKN8 822 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 ITGA11Q9UKX5 1188 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 L1RE1Q9UN81 338 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 PCDHB13Q9Y5F0 798 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 PCDHGA5Q9Y5G8 931 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 NUP205Q92621 2012 aa11.48□□□□□ -0.57
VPS26B-203ENST00000525918 PTPRDP23468 1912 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 MYMKA6NI61 221 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 TM4SF5O14894 197 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 TADA3O75528 432 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 GCNT3O95395 438 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 GARTP22102 1010 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 ACAT1P24752 427 aaKnown RBP11.47□□□□□ -0.57
VPS26B-203ENST00000525918 LHX1P48742 406 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 WNT7BP56706 349 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 MTF1Q14872 753 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 CCDC6Q16204 474 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 ST3GAL2Q16842 350 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 CFAP221Q4G0U5 840 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 PLA2G2CQ5R387 149 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 RRAGBQ5VZM2 374 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 SYT13Q7L8C5 426 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 SPATA2LQ8IUW3 424 aaPredicted RBP11.47□□□□□ -0.57
VPS26B-203ENST00000525918 SYCP3Q8IZU3 236 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 TOP6BLQ8N6T0 577 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 STKLD1Q8NE28 680 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 ZSWIM2Q8NEG5 633 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 CXorf38Q8TB03 319 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 RIN3Q8TB24 985 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 ATP2A3Q93084 1043 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 DNAJC19Q96DA6 116 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 SAAL1Q96ER3 474 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 FUBP3Q96I24 572 aaKnown RBP eCLIP11.47□□□□□ -0.57
VPS26B-203ENST00000525918 CYP2S1Q96SQ9 504 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 PKMYT1Q99640 499 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 TMEM206Q9H813 350 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 TRPC7Q9HCX4 862 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 OLFML3Q9NRN5 406 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 DUS2Q9NX74 493 aaKnown RBP11.47□□□□□ -0.57
VPS26B-203ENST00000525918 RBAKQ9NYW8 714 aaPredicted RBP11.47□□□□□ -0.57
VPS26B-203ENST00000525918 TBC1D7Q9P0N9 293 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 SNX9Q9Y5X1 595 aa11.47□□□□□ -0.57
VPS26B-203ENST00000525918 TRAV19A0A0A6YYK7 116 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 GABRDO14764 452 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 CKMP06732 381 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 KRT19P08727 400 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 PCSK1P29120 753 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 TXLNAP40222 546 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 MPLP40238 635 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 IFNAR2P48551 515 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 RBP5P82980 135 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 MYO1EQ12965 1108 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 NR1H3Q13133 447 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 ALCAMQ13740 583 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 ZNF77Q15935 545 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 EML3Q32P44 896 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 STPG1Q5TH74 334 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 DPH6Q7L8W6 267 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 RPLP0P6Q8NHW5 317 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 CCDC26Q8TAB7 109 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 CD101Q93033 1021 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 HHIPQ96QV1 700 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 SLC22A12Q96S37 553 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 UPF2Q9HAU5 1272 aaKnown RBP11.46□□□□□ -0.57
VPS26B-203ENST00000525918 VPS45Q9NRW7 570 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 RXFP3Q9NSD7 469 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 EBF1Q9UH73 591 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 FBXO2Q9UK22 296 aaPredicted RBP11.46□□□□□ -0.57
VPS26B-203ENST00000525918 ANGPTL2Q9UKU9 493 aa11.46□□□□□ -0.57
VPS26B-203ENST00000525918 R3HCC1Q9Y3T6 440 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms