RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 PRAMEF13Q5VWM6 474 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 MCTP1Q6DN14 999 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 CYP20A1Q6UW02 462 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 IKBIPQ70UQ0 350 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 HEATR3Q7Z4Q2 680 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 RAB44Q7Z6P3 723 aaPredicted RBP4.82□□□□□ -1.64
CD44-213ENST00000525209 NLRP10Q86W26 655 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 DZIP1Q86YF9 867 aaKnown RBP4.82□□□□□ -1.64
CD44-213ENST00000525209 USP38Q8NB14 1042 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 C3orf20Q8ND61 904 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 SPATA20Q8TB22 786 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 SLC22A17Q8WUG5 538 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 DPF2Q92785 391 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 KCNN1Q92952 543 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 FAM162AQ96A26 154 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 CFAP36Q96G28 342 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 GBP5Q96PP8 586 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 ADAM7Q9H2U9 754 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 CDIP1Q9H305 208 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 OPA3Q9H6K4 179 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 SNX15Q9NRS6 342 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 GFOD1Q9NXC2 390 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 TAB2Q9NYJ8 693 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 NDUFAF4Q9P032 175 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 CALCOCO1Q9P1Z2 691 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 ANAPC5Q9UJX4 755 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 MTO1Q9Y2Z2 717 aaKnown RBP4.82□□□□□ -1.64
CD44-213ENST00000525209 PCDHA2Q9Y5H9 948 aa4.82□□□□□ -1.64
CD44-213ENST00000525209 AQRO60306 1485 aaKnown RBP eCLIP4.81□□□□□ -1.64
CD44-213ENST00000525209 TSPOAP1O95153 1857 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 LINC00854A0A1B0GVQ3 168 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 TCRBV5S4A2TA0A5A2 114 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 TRIM43BA6NCK2 446 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 M0QX08 132 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 GNB5O14775 395 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 TBC1D4O60343 1298 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 PHF2O75151 1096 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 ADAMTS4O75173 837 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 SASH1O94885 1247 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 DLGAP3O95886 979 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 TOP1P11387 765 aaKnown RBP4.81□□□□□ -1.64
CD44-213ENST00000525209 NPPBP16860 134 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 KCNA5P22460 613 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 MATR3P43243 847 aaKnown RBP eCLIP4.81□□□□□ -1.64
CD44-213ENST00000525209 ARFIP2P53365 341 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 RARSP54136 660 aaKnown RBP4.81□□□□□ -1.64
CD44-213ENST00000525209 RPS3AP61247 264 aaKnown RBP4.81□□□□□ -1.64
CD44-213ENST00000525209 GBE1Q04446 702 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 SEC23BQ15437 767 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 NR0B2Q15466 257 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 ADRM1Q16186 407 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 GEN1Q17RS7 908 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 ZNF805Q5CZA5 627 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 ZBTB41Q5SVQ8 909 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 ERMARDQ5T6L9 678 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 NAA35Q5VZE5 725 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 INO80CQ6PI98 192 aaPredicted RBP4.81□□□□□ -1.64
CD44-213ENST00000525209 SLC30A9Q6PML9 568 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 PET117Q6UWS5 81 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 ARHGAP36Q6ZRI8 547 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 RGS9BPQ6ZS82 235 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 RNF44Q7L0R7 432 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 CDC37L1Q7L3B6 337 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 MIGA2Q7L4E1 593 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 CCDC186Q7Z3E2 898 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 SYT9Q86SS6 491 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 CDH24Q86UP0 819 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 NME9Q86XW9 330 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 LYSMD2Q8IV50 215 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 GALNT4Q8N4A0 578 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.81□□□□□ -1.64
CD44-213ENST00000525209 VGLL2Q8N8G2 317 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 GMCL1P1Q8NEA9 526 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 GPR150Q8NGU9 434 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 FIBINQ8TAL6 211 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 FATE1Q969F0 183 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 TRIM43Q96BQ3 446 aaPredicted RBP4.81□□□□□ -1.64
CD44-213ENST00000525209 LRRC46Q96FV0 321 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 APOPT1Q96IL0 206 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 CCDC114Q96M63 670 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 FBXL18Q96ME1 805 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 DMRTA2Q96SC8 542 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 KCNJ15Q99712 375 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 RTKNQ9BST9 563 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 DSCC1Q9BVC3 393 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 MAGEB5Q9BZ81 275 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 OSBPL6Q9BZF3 934 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 RC3H2Q9HBD1 1191 aaKnown RBP4.81□□□□□ -1.64
CD44-213ENST00000525209 NRIP3Q9NQ35 241 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 TCF7L2Q9NQB0 619 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 SLC35C2Q9NQQ7 365 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 CNNM1Q9NRU3 951 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 TAS2R10Q9NYW0 307 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 PLA2G3Q9NZ20 509 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 SELENONQ9NZV5 590 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 CLEC1BQ9P126 229 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 SUCLA2Q9P2R7 463 aaPredicted RBP4.81□□□□□ -1.64
CD44-213ENST00000525209 LPAR3Q9UBY5 353 aa4.81□□□□□ -1.64
CD44-213ENST00000525209 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.81□□□□□ -1.64
CD44-213ENST00000525209 ZNF281Q9Y2X9 895 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms