RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 MICAL2O94851 1124 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 RTN3O95197 1032 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 FAM200BP0CF97 657 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 LAMP2P13473 410 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 CDK11BP21127 795 aaKnown RBP5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 RFX1P22670 979 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 BDNFP23560 247 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 CYP2F1P24903 491 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 DDX6P26196 483 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 PDE6CP51160 858 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 CDR1P51861 262 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 MFAP3P55082 362 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 MCCD1P59942 119 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 NTHL1P78549 312 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 INCA1Q0VD86 236 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 LRMPQ12912 555 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 KCNJ12Q14500 433 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 PTPN21Q16825 1174 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 DDR2Q16832 855 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 EXOC3L4Q17RC7 722 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 SCARA3Q6AZY7 606 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 FAM171BQ6P995 826 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 DNAJB7Q7Z6W7 309 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 FAM35AQ86V20 835 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 LRRTM3Q86VH5 581 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 RNF135Q8IUD6 432 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 UBALD2Q8IYN6 164 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 TTC9BQ8N6N2 239 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 ENOX1Q8TC92 643 aaKnown RBP5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 GIPC2Q8TF65 315 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 MRPS31Q92665 395 aaKnown RBP5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 SEMA4DQ92854 862 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 FGF13Q92913 245 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 C8orf48Q96LL4 319 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 HEXIM2Q96MH2 286 aaKnown RBP5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 SLITRK1Q96PX8 696 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 PKMYT1Q99640 499 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 LPIN3Q9BQK8 851 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 TUBGCP2Q9BSJ2 902 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 DNAJC25Q9H1X3 360 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 ATXN3LQ9H3M9 355 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 DPEP3Q9H4B8 488 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 APOBEC3GQ9HC16 384 aaKnown RBP5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 CRTAC1Q9NQ79 661 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 KRT82Q9NSB4 513 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 CISHQ9NSE2 258 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 FAM49BQ9NUQ9 324 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 TMLHEQ9NVH6 421 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 TMEM63CQ9P1W3 806 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 CEP72Q9P209 647 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 EPS15L1Q9UBC2 864 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 DNMT3BQ9UBC3 853 aaKnown RBP5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 HESX1Q9UBX0 185 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 LIMD1Q9UGP4 676 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 SORCS3Q9UPU3 1222 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 ANK1P16157 1881 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 TSC2P49815 1807 aa5.74□□□□□ -1.49
HMGB1P40-201ENST00000525121 PLXNA3P51805 1871 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 A0A1W2PRU2 124 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 GTPBP10A4D1E9 387 aaKnown RBP5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 SLC38A8A6NNN8 435 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 F8VP50 259 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 GOLGA6L19H0YKK7 550 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 NOL4O94818 638 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 VNN2O95498 520 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 CAVIN2O95810 425 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 KRT5P13647 590 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 CCDC130P13994 396 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 CD19P15391 556 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 CEBPBP17676 345 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 ATF6P18850 670 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 GABRR2P28476 465 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 ADORA2BP29275 332 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 AVPR1AP37288 418 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 PPP3CCP48454 512 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 EPHA5P54756 1037 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 GCNT1Q02742 428 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 IFRD2Q12894 506 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 ORC1Q13415 861 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 TDGQ13569 410 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 STILQ15468 1287 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 TEAD2Q15562 447 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 SLC5A9Q2M3M2 681 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 ANO6Q4KMQ2 910 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 VWA3BQ502W6 1294 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 ZNF394Q53GI3 561 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 SGO2Q562F6 1265 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 HSP90AA4PQ58FG1 418 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 TCP11X2Q5H9J9 407 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 GPR158Q5T848 1215 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 C11orf57Q6ZUT1 292 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 DENND5BQ6ZUT9 1274 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 NPAS3Q8IXF0 933 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 YAF2Q8IY57 180 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 HS6ST3Q8IZP7 471 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 CRYBG2Q8N1P7 616 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 AOPEPQ8N6M6 819 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 EHBP1Q8NDI1 1231 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 STKLD1Q8NE28 680 aa5.73□□□□□ -1.49
HMGB1P40-201ENST00000525121 PDZD8Q8NEN9 1154 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms