RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 CCDC142Q17RM4 750 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 TEX35Q5T0J7 233 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 PMF1Q6P1K2 205 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 TMEM110Q86TL2 294 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 COLGALT2Q8IYK4 626 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 TMEM86AQ8N2M4 240 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 ANKRD52Q8NB46 1076 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 MSANTD4Q8NCY6 345 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 C3orf20Q8ND61 904 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 SPATA4Q8NEY3 305 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 STK32AQ8WU08 396 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 UBXN4Q92575 508 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 SEPT8Q92599 483 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 C18orf8Q96DM3 657 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 UROC1Q96N76 676 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 MRPL47Q9HD33 250 aaKnown RBP12.43□□□□□ -0.42
CSTF3-205ENST00000524775 CRTAC1Q9NQ79 661 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 FAM49BQ9NUQ9 324 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 TMEM161AQ9NX61 479 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 CEP83Q9Y592 693 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 SCINQ9Y6U3 715 aa12.43□□□□□ -0.42
CSTF3-205ENST00000524775 COL4A4P53420 1690 aaPredicted RBP12.42□□□□□ -0.42
CSTF3-205ENST00000524775 KIAA1671Q9BY89 1806 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 F8W810 466 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 MYO1FO00160 1098 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 ITGB1P05556 798 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 CCDC130P13994 396 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 PTPN1P18031 435 aaKnown RBP12.42□□□□□ -0.42
CSTF3-205ENST00000524775 PAX3P23760 479 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 CYP2C18P33260 490 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 SLC1A1P43005 524 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 BRCC3P46736 316 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 TAS2R40P59535 323 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 TUBB4BP68371 445 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 TAP1Q03518 808 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 PDE4CQ08493 712 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 C2orf54Q08AI8 447 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 PKN2Q16513 984 aaKnown RBP12.42□□□□□ -0.42
CSTF3-205ENST00000524775 CFAP221Q4G0U5 840 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 NOMO2Q5JPE7 1267 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 TRNP1Q6NT89 227 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 DCLRE1AQ6PJP8 1040 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 FUKQ8N0W3 1084 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 ARFGAP1Q8N6T3 406 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 GPR161Q8N6U8 529 aaKnown RBP12.42□□□□□ -0.42
CSTF3-205ENST00000524775 NIPA2Q8N8Q9 360 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 ANKLE1Q8NAG6 615 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 JOSD2Q8TAC2 188 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 SPATA18Q8TC71 538 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 APBB2Q92870 758 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 SCLYQ96I15 445 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 CASD1Q96PB1 797 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 PKMYT1Q99640 499 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 HNRNPABQ99729 332 aaKnown RBP12.42□□□□□ -0.42
CSTF3-205ENST00000524775 CARD9Q9H257 536 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 HIPK3Q9H422 1215 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 RBM12Q9NTZ6 932 aaKnown RBP12.42□□□□□ -0.42
CSTF3-205ENST00000524775 TBC1D13Q9NVG8 400 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 WDR35Q9P2L0 1181 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 INPP5FQ9Y2H2 1132 aa12.42□□□□□ -0.42
CSTF3-205ENST00000524775 DCDC2CA8MYV0 355 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 TMEM189-UBE2V1I3L0A0 370 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 I3L4J1 428 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 CEP104O60308 925 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 PYGMP11217 842 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 H2AFXP16104 143 aaPredicted RBP12.41□□□□□ -0.42
CSTF3-205ENST00000524775 ACAT1P24752 427 aaKnown RBP12.41□□□□□ -0.42
CSTF3-205ENST00000524775 RFC1P35251 1148 aaPredicted RBP12.41□□□□□ -0.42
CSTF3-205ENST00000524775 PAFAH1B1P43034 410 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 LHX1P48742 406 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 LBX1P52954 281 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 CCL23P55773 120 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 PSMC1P62191 440 aaKnown RBP12.41□□□□□ -0.42
CSTF3-205ENST00000524775 DAB2IPQ5VWQ8 1189 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 AADACL2Q6P093 401 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 DNAJC24Q6P3W2 148 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 GLB1LQ6UWU2 654 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 ZDHHC14Q8IZN3 488 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 B3GALNT2Q8NCR0 500 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 RSPH1Q8WYR4 309 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 SUSD3Q96L08 255 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.41□□□□□ -0.42
CSTF3-205ENST00000524775 SELENOOQ9BVL4 669 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 B3GNT5Q9BYG0 378 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 IP6K2Q9UHH9 426 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 RAB21Q9UL25 225 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 STRIP2Q9ULQ0 834 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 NR2E1Q9Y466 385 aa12.41□□□□□ -0.42
CSTF3-205ENST00000524775 TIMM13Q9Y5L4 95 aaPredicted RBP12.41□□□□□ -0.42
CSTF3-205ENST00000524775 CCDC66A2RUB6 948 aa12.4□□□□□ -0.42
CSTF3-205ENST00000524775 BHMG1C9JSJ3 638 aaPredicted RBP12.4□□□□□ -0.42
CSTF3-205ENST00000524775 E5RJQ4 531 aa12.4□□□□□ -0.42
CSTF3-205ENST00000524775 CAPN15O75808 1086 aa12.4□□□□□ -0.42
CSTF3-205ENST00000524775 PARNO95453 639 aaKnown RBP12.4□□□□□ -0.42
CSTF3-205ENST00000524775 TCF4P15884 667 aa12.4□□□□□ -0.42
CSTF3-205ENST00000524775 IBSPP21815 317 aaPredicted RBP12.4□□□□□ -0.42
CSTF3-205ENST00000524775 RGS7P49802 495 aa12.4□□□□□ -0.42
CSTF3-205ENST00000524775 GATMP50440 423 aa12.4□□□□□ -0.42
CSTF3-205ENST00000524775 RNASE9P60153 205 aaKnown RBP12.4□□□□□ -0.42
CSTF3-205ENST00000524775 BST2Q10589 180 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms