RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 CDKAL1Q5VV42 579 aa16.09■□□□□ 0.17
SF3B2-202ENST00000524475 C11orf57Q6ZUT1 292 aaPredicted RBP16.09■□□□□ 0.17
SF3B2-202ENST00000524475 TMC8Q8IU68 726 aa16.09■□□□□ 0.17
SF3B2-202ENST00000524475 ELMO3Q96BJ8 720 aa16.09■□□□□ 0.17
SF3B2-202ENST00000524475 SPATA17Q96L03 361 aa16.09■□□□□ 0.17
SF3B2-202ENST00000524475 NT5C1BQ96P26 610 aa16.09■□□□□ 0.17
SF3B2-202ENST00000524475 BPIFA3Q9BQP9 254 aa16.09■□□□□ 0.17
SF3B2-202ENST00000524475 NT5C1AQ9BXI3 368 aa16.09■□□□□ 0.17
SF3B2-202ENST00000524475 NAT10Q9H0A0 1025 aaKnown RBP16.09■□□□□ 0.17
SF3B2-202ENST00000524475 CD320Q9NPF0 282 aa16.09■□□□□ 0.17
SF3B2-202ENST00000524475 GDE1Q9NZC3 331 aa16.09■□□□□ 0.17
SF3B2-202ENST00000524475 ATP8B3O60423 1300 aa16.09■□□□□ 0.17
SF3B2-202ENST00000524475 GREB1Q4ZG55 1949 aa16.09■□□□□ 0.17
SF3B2-202ENST00000524475 TNFRSF10AO00220 468 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 TRIM66O15016 1216 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 CSH1P0DML2 217 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 CSH2P0DML3 217 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 CYP2F1P24903 491 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 SSTR3P32745 418 aaPredicted RBP16.08■□□□□ 0.16
SF3B2-202ENST00000524475 MTIF2P46199 727 aaKnown RBP16.08■□□□□ 0.16
SF3B2-202ENST00000524475 NTHL1P78549 312 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 MYL5Q02045 173 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 CYP4A22Q5TCH4 519 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 PDZD4Q76G19 769 aaPredicted RBP16.08■□□□□ 0.16
SF3B2-202ENST00000524475 DNAJB7Q7Z6W7 309 aaPredicted RBP16.08■□□□□ 0.16
SF3B2-202ENST00000524475 UBR7Q8N806 425 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 EHBP1Q8NDI1 1231 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 WHAMMQ8TF30 809 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 TATDN2Q93075 761 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 NXPE3Q969Y0 559 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 JAKMIP2Q96AA8 810 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 TRMT2BQ96GJ1 504 aaKnown RBP16.08■□□□□ 0.16
SF3B2-202ENST00000524475 C8orf48Q96LL4 319 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 FAM81BQ96LP2 452 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 MYADMQ96S97 322 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 CORO1BQ9BR76 489 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 FUCA2Q9BTY2 467 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 CISHQ9NSE2 258 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 SAMSN1Q9NSI8 373 aaKnown RBP16.08■□□□□ 0.16
SF3B2-202ENST00000524475 HMGXB4Q9UGU5 601 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 CDH7Q9ULB5 785 aa16.08■□□□□ 0.16
SF3B2-202ENST00000524475 MRPS23Q9Y3D9 190 aaKnown RBP16.08■□□□□ 0.16
SF3B2-202ENST00000524475 KCNJ18B7U540 433 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 SOAT2O75908 522 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 NOL4O94818 638 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 LAMP2P13473 410 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 CYP27A1Q02318 531 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 KCNJ12Q14500 433 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 SLC5A9Q2M3M2 681 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 TCP11X2Q5H9J9 407 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 GET4Q7L5D6 327 aaPredicted RBP16.07■□□□□ 0.16
SF3B2-202ENST00000524475 ACOT1Q86TX2 421 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 NPAS3Q8IXF0 933 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 FUKQ8N0W3 1084 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 ITFG1Q8TB96 612 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 FGF13Q92913 245 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 SMARCD1Q96GM5 515 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 MYRFLQ96LU7 910 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 TWNKQ96RR1 684 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 TUBGCP2Q9BSJ2 902 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 B3GNT5Q9BYG0 378 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 GPR88Q9GZN0 384 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.07■□□□□ 0.167e-10■■■■■ 30.5
SF3B2-202ENST00000524475 GCNT4Q9P109 453 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 ZMYM5Q9UJ78 669 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 DENND4CQ5VZ89 1909 aa16.07■□□□□ 0.16
SF3B2-202ENST00000524475 SOBPA7XYQ1 873 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 MOSPD3O75425 235 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 HMGA1P17096 107 aaKnown RBP16.06■□□□□ 0.16
SF3B2-202ENST00000524475 CD58P19256 250 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 BDNFP23560 247 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 GBP2P32456 591 aaPredicted RBP16.06■□□□□ 0.16
SF3B2-202ENST00000524475 CCR2P41597 374 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 VWA3BQ502W6 1294 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 MIIPQ5JXC2 388 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 GBP6Q6ZN66 633 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 PAQR9Q6ZVX9 377 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 ENOSF1Q7L5Y1 443 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 FAM35AQ86V20 835 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 RNF135Q8IUD6 432 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 HNRNPABQ99729 332 aaKnown RBP16.06■□□□□ 0.16
SF3B2-202ENST00000524475 ARID3AQ99856 593 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 LPIN3Q9BQK8 851 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 INTS2Q9H0H0 1204 aaKnown RBP16.06■□□□□ 0.16
SF3B2-202ENST00000524475 NDST4Q9H3R1 872 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 CSNK1G1Q9HCP0 422 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 IGSF9Q9P2J2 1179 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 UXTQ9UBK9 157 aaPredicted RBP16.06■□□□□ 0.16
SF3B2-202ENST00000524475 MYO10Q9HD67 2058 aa16.06■□□□□ 0.16
SF3B2-202ENST00000524475 ANHXE9PGG2 379 aa16.05■□□□□ 0.16
SF3B2-202ENST00000524475 ZNF18P17022 549 aa16.05■□□□□ 0.16
SF3B2-202ENST00000524475 CDC25CP30307 473 aa16.05■□□□□ 0.16
SF3B2-202ENST00000524475 NCAPHQ15003 741 aa16.05■□□□□ 0.16
SF3B2-202ENST00000524475 DDR2Q16832 855 aa16.05■□□□□ 0.16
SF3B2-202ENST00000524475 EXOC3L4Q17RC7 722 aa16.05■□□□□ 0.16
SF3B2-202ENST00000524475 ANO6Q4KMQ2 910 aa16.05■□□□□ 0.16
SF3B2-202ENST00000524475 TRIM65Q6PJ69 517 aa16.05■□□□□ 0.16
SF3B2-202ENST00000524475 HS6ST3Q8IZP7 471 aa16.05■□□□□ 0.16
SF3B2-202ENST00000524475 PPM1KQ8N3J5 372 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms