RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 C2CD2Q9Y426 696 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 PCDHB12Q9Y5F1 795 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 CAPN6Q9Y6Q1 641 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 MYO7AQ13402 2215 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 A0A0U1RQJ8 604 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 GOLGA8IPA6NC78 632 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 GOLGA8JA6NMD2 632 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 F8W810 466 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 PER2O15055 1255 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 SPTLC1O15269 473 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 ADH1BP00325 375 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 ABL1P00519 1130 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 HLA-DRAP01903 254 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 ATP1A1P05023 1023 aaKnown RBP7.53□□□□□ -1.2
VPS11-201ENST00000524454 DLATP10515 647 aaKnown RBP7.53□□□□□ -1.2
VPS11-201ENST00000524454 ITGA4P13612 1032 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 CYP11B1P15538 503 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 TNNI1P19237 187 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 TNFAIP3P21580 790 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 PIK3CAP42336 1068 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 PAFAH1B1P43034 410 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 NRIP1P48552 1158 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 SLC11A1P49279 550 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 SCNN1GP51170 649 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 MRPS5P82675 430 aaKnown RBP7.53□□□□□ -1.2
VPS11-201ENST00000524454 APBA1Q02410 837 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 ARID5AQ03989 594 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 DLX2Q07687 328 aaPredicted RBP7.53□□□□□ -1.2
VPS11-201ENST00000524454 CUL2Q13617 745 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 NCOA4Q13772 614 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 SGSM1Q2NKQ1 1148 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 ZNF568Q3ZCX4 644 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 CFAP221Q4G0U5 840 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 NOTUMQ6P988 496 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 GLB1LQ6UWU2 654 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 MRPL10Q7Z7H8 261 aaKnown RBP7.53□□□□□ -1.2
VPS11-201ENST00000524454 CREG2Q8IUH2 290 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 GLYCTKQ8IVS8 523 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 ARHGEF19Q8IW93 802 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 SLC39A11Q8N1S5 342 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 MMGT1Q8N4V1 131 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 EIF1ADQ8N9N8 165 aaKnown RBP7.53□□□□□ -1.2
VPS11-201ENST00000524454 TPCN2Q8NHX9 752 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 LNX1Q8TBB1 728 aaPredicted RBP7.53□□□□□ -1.2
VPS11-201ENST00000524454 MICAL1Q8TDZ2 1067 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 ATRIPQ8WXE1 791 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.53□□□□□ -1.2
VPS11-201ENST00000524454 SEMA4DQ92854 862 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 PGBD4Q96DM1 585 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 ANKRD36BP1Q96IX9 119 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 RPS6KC1Q96S38 1066 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 OSBPL9Q96SU4 736 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 GAD1Q99259 594 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 NAP1L3Q99457 506 aaPredicted RBP7.53□□□□□ -1.2
VPS11-201ENST00000524454 TRAIPQ9BWF2 469 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 TLR10Q9BXR5 811 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 TRIM6Q9C030 488 aaPredicted RBP7.53□□□□□ -1.2
VPS11-201ENST00000524454 ZNF518BQ9C0D4 1074 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 NIF3L1Q9GZT8 377 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 HAPLN2Q9GZV7 340 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 PDCL3Q9H2J4 239 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 PDZD7Q9H5P4 517 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 RSAD1Q9HA92 442 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 PLEKHA5Q9HAU0 1116 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 AAASQ9NRG9 546 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 MIOSQ9NXC5 875 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 CLDND1Q9NY35 253 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 ANKFY1Q9P2R3 1169 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 TRIM10Q9UDY6 481 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 PARP2Q9UGN5 583 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 DUSP10Q9Y6W6 482 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 PLXNA3P51805 1871 aa7.53□□□□□ -1.2
VPS11-201ENST00000524454 A0A1B0GUA9 196 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 ARL5CA6NH57 179 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 HIDE1A8MVS5 230 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 ZNF623O75123 536 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 TBX10O75333 385 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 ERLIN1O75477 346 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 MOCS3O95396 460 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 VNN1O95497 513 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 TNNC2P02585 160 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 CYP1A2P05177 515 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 HARSP12081 509 aaKnown RBP7.52□□□□□ -1.21
VPS11-201ENST00000524454 SKIP12755 728 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 P4HA1P13674 534 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 ACO1P21399 889 aaKnown RBP7.52□□□□□ -1.21
VPS11-201ENST00000524454 TNFRSF8P28908 595 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 MATR3P43243 847 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS11-201ENST00000524454 ACOT2P49753 483 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 ZNF132P52740 706 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 GALCP54803 685 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 NOP14P78316 857 aaKnown RBP7.52□□□□□ -1.21
VPS11-201ENST00000524454 GPC5P78333 572 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 CENPCQ03188 943 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 ELF2Q15723 593 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 ARHGAP44Q17R89 818 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 ERCC6LQ2NKX8 1250 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 LLGL2Q6P1M3 1020 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 SLC27A1Q6PCB7 646 aa7.52□□□□□ -1.21
VPS11-201ENST00000524454 GJB7Q6PEY0 223 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms