RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 SECISBP2LQ93073 1101 aaKnown RBP20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 DHX58Q96C10 678 aa20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 ANKRD36BP1Q96IX9 119 aa20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 TDP1Q9NUW8 608 aa20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 HSPBP1Q9NZL4 362 aa20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 ZMYM5Q9UJ78 669 aa20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 TCHHQ07283 1943 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 ZNF233A6NK53 670 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 LMO2P25791 158 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 LHX1P48742 406 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 RPL10AP62906 217 aaKnown RBP20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 RUNX3Q13761 415 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 CFAP221Q4G0U5 840 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 FAM171BQ6P995 826 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 GPR161Q8N6U8 529 aaKnown RBP20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 SPATA18Q8TC71 538 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 ZNF507Q8TCN5 953 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 MRPS31Q92665 395 aaKnown RBP20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 TRMT2BQ96GJ1 504 aaKnown RBP20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 HPDLQ96IR7 371 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 MYRFLQ96LU7 910 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 LRRC27Q9C0I9 530 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 CUEDC2Q9H467 287 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 EBF3Q9H4W6 596 aa20.15■□□□□ 0.82
PTP4A3-206ENST00000524028 SOBPA7XYQ1 873 aa20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 TGFB1I1O43294 461 aa20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 CUTAO60888 179 aa20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 ARSAP15289 507 aa20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 MYO1EQ12965 1108 aa20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 DUOXA2Q1HG44 320 aa20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 FOXD4L5Q5VV16 416 aaPredicted RBP20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 HEATR6Q6AI08 1181 aaKnown RBP20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 CNNM4Q6P4Q7 775 aa20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 PKN3Q6P5Z2 889 aa20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 STXBP4Q6ZWJ1 553 aa20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 SPATA2LQ8IUW3 424 aaPredicted RBP20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 FOXD4L4Q8WXT5 416 aaPredicted RBP20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 ZNF396Q96N95 335 aaPredicted RBP20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 SLC22A12Q96S37 553 aa20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 CYP2S1Q96SQ9 504 aa20.14■□□□□ 0.81
PTP4A3-206ENST00000524028 EIF3DO15371 548 aaKnown RBP eCLIP20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 YEATS4O95619 227 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 CST3P01034 146 aaPredicted RBP20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 TNNC2P02585 160 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 PCSK1P29120 753 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 CASP1P29466 404 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 PSMC1P62191 440 aaKnown RBP20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 ASIC1P78348 528 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 TMEM196Q5HYL7 178 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 LAIR1Q6GTX8 287 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 FSTL4Q6MZW2 842 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 PRR23BQ6ZRT6 265 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 DPH6Q7L8W6 267 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 LONP2Q86WA8 852 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 SCN4BQ8IWT1 228 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 SYNPOQ8N3V7 929 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 RDH13Q8NBN7 331 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 FUBP3Q96I24 572 aaKnown RBP eCLIP20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 C7orf25Q9BPX7 421 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 KIF9Q9HAQ2 790 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 FBRSL1Q9HCM7 1045 aaKnown RBP20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 CRTAC1Q9NQ79 661 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 AGPAT3Q9NRZ7 376 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 UXTQ9UBK9 157 aaPredicted RBP20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 GMEB2Q9UKD1 530 aa20.13■□□□□ 0.81
PTP4A3-206ENST00000524028 AMPD3Q01432 767 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 EHHADHQ08426 723 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 SPEM2Q0P670 501 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 SIM2Q14190 667 aaPredicted RBP20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 ZNF268Q14587 947 aaPredicted RBP20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 SURF1Q15526 300 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 FOXD4L6Q3SYB3 417 aaPredicted RBP20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 FAM26FQ5R3K3 315 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 NAIF1Q69YI7 327 aaPredicted RBP20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 FOXD4L3Q6VB84 417 aaPredicted RBP20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 TRAPPC11Q7Z392 1133 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 WDR49Q8IV35 697 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 IQUBQ8NA54 791 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 SYT15Q9BQS2 421 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 KIAA1586Q9HCI6 787 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 TRPC7Q9HCX4 862 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 RAB23Q9ULC3 237 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 USP18Q9UMW8 372 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 NME7Q9Y5B8 376 aa20.12■□□□□ 0.81
PTP4A3-206ENST00000524028 KIF26AQ9ULI4 1882 aaPredicted RBP20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 TRDMT1O14717 391 aaKnown RBP20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 CLIC2O15247 247 aa20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 PDGFRBP09619 1106 aa20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 WARSP23381 471 aaKnown RBP20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 HOXA6P31267 233 aa20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 MAGEA11P43364 429 aa20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 ATXN1P54253 815 aaKnown RBP20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 SNRNP35Q16560 246 aaKnown RBP20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 NELFCDQ8IXH7 590 aa20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 SCFD1Q8WVM8 642 aa20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 MYLPFQ96A32 169 aa20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 MRPL45Q9BRJ2 306 aaKnown RBP20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 GZF1Q9H116 711 aaPredicted RBP20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 BLZF1Q9H2G9 400 aa20.11■□□□□ 0.81
PTP4A3-206ENST00000524028 GCNT4Q9P109 453 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms