RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 R3HCC1Q9Y3T6 440 aaKnown RBP18.02■□□□□ 0.48
SPIDR-221ENST00000523814 NUP210Q8TEM1 1887 aaPredicted RBP18.01■□□□□ 0.47
SPIDR-221ENST00000523814 PAPSS2O95340 614 aaPredicted RBP18.01■□□□□ 0.47
SPIDR-221ENST00000523814 ZSCAN22P10073 491 aaPredicted RBP18.01■□□□□ 0.47
SPIDR-221ENST00000523814 MAGEA11P43364 429 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 SATB1Q01826 763 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 CCINQ13939 588 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 ZNF268Q14587 947 aaPredicted RBP18.01■□□□□ 0.47
SPIDR-221ENST00000523814 FAM26FQ5R3K3 315 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 TXNDC8Q6A555 127 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 SPATA2LQ8IUW3 424 aaPredicted RBP18.01■□□□□ 0.47
SPIDR-221ENST00000523814 WDR49Q8IV35 697 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 GPR161Q8N6U8 529 aaKnown RBP18.01■□□□□ 0.47
SPIDR-221ENST00000523814 KBTBD7Q8WVZ9 684 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 MRPS31Q92665 395 aaKnown RBP18.01■□□□□ 0.47
SPIDR-221ENST00000523814 RMDN1Q96DB5 314 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 MAGEF1Q9HAY2 307 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 AGPAT3Q9NRZ7 376 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 RBM12Q9NTZ6 932 aaKnown RBP18.01■□□□□ 0.47
SPIDR-221ENST00000523814 NCDNQ9UBB6 729 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 MAGED2Q9UNF1 606 aaPredicted RBP18.01■□□□□ 0.47
SPIDR-221ENST00000523814 SMG5Q9UPR3 1016 aaKnown RBP18.01■□□□□ 0.47
SPIDR-221ENST00000523814 CCL26Q9Y258 94 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 DMXL1Q9Y485 3027 aa18.01■□□□□ 0.47
SPIDR-221ENST00000523814 POLR2DO15514 142 aaKnown RBP18■□□□□ 0.47
SPIDR-221ENST00000523814 HCRTO43612 131 aa18■□□□□ 0.47
SPIDR-221ENST00000523814 LMO2P25791 158 aa18■□□□□ 0.47
SPIDR-221ENST00000523814 PON2Q15165 354 aa18■□□□□ 0.47
SPIDR-221ENST00000523814 SNRNP35Q16560 246 aaKnown RBP18■□□□□ 0.47
SPIDR-221ENST00000523814 FOXD4L5Q5VV16 416 aaPredicted RBP18■□□□□ 0.47
SPIDR-221ENST00000523814 ATL3Q6DD88 541 aa18■□□□□ 0.47
SPIDR-221ENST00000523814 UNC13DQ70J99 1090 aa18■□□□□ 0.47
SPIDR-221ENST00000523814 TRAPPC11Q7Z392 1133 aa18■□□□□ 0.47
SPIDR-221ENST00000523814 STKLD1Q8NE28 680 aa18■□□□□ 0.47
SPIDR-221ENST00000523814 SCFD1Q8WVM8 642 aa18■□□□□ 0.47
SPIDR-221ENST00000523814 FOXD4L4Q8WXT5 416 aaPredicted RBP18■□□□□ 0.47
SPIDR-221ENST00000523814 SECISBP2LQ93073 1101 aaKnown RBP18■□□□□ 0.47
SPIDR-221ENST00000523814 KIF9Q9HAQ2 790 aa18■□□□□ 0.47
SPIDR-221ENST00000523814 CDH9Q9ULB4 789 aa18■□□□□ 0.47
SPIDR-221ENST00000523814 UBE4BO95155 1302 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 PVALEFA0A1B0GWK0 134 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 ATP2C2O75185 946 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 F13A1P00488 732 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 FAM163BP0C2L3 166 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 WARSP23381 471 aaKnown RBP17.99■□□□□ 0.47
SPIDR-221ENST00000523814 RUNX3Q13761 415 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 PSMD6Q15008 389 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 CCDC142Q17RM4 750 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 C4orf50Q6ZRC1 276 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 Q6ZS52 159 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 RDH13Q8NBN7 331 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 HPS4Q9NQG7 708 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 PCDHA7Q9UN72 937 aa17.99■□□□□ 0.47
SPIDR-221ENST00000523814 OTOL1A6NHN0 477 aaPredicted RBP17.98■□□□□ 0.47
SPIDR-221ENST00000523814 K7ESF4 209 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 TADA3O75528 432 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 CST3P01034 146 aaPredicted RBP17.98■□□□□ 0.47
SPIDR-221ENST00000523814 HOXA6P31267 233 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 CYP24A1Q07973 514 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 MAPRE1Q15691 268 aaKnown RBP17.98■□□□□ 0.47
SPIDR-221ENST00000523814 BMT2Q1RMZ1 405 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 RESP18Q5W5W9 173 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 VSTM1Q6UX27 236 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 XXYLT1Q8NBI6 393 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 SPATA17Q96L03 361 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 CEP295NLQ96MC4 621 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 SYT15Q9BQS2 421 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 EBF3Q9H4W6 596 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 CRTAC1Q9NQ79 661 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 FAM13BQ9NYF5 915 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 DLL3Q9NYJ7 618 aa17.98■□□□□ 0.47
SPIDR-221ENST00000523814 CGNQ9P2M7 1197 aaKnown RBP17.98■□□□□ 0.47
SPIDR-221ENST00000523814 MAGEC2Q9UBF1 373 aaPredicted RBP17.98■□□□□ 0.47
SPIDR-221ENST00000523814 TRDMT1O14717 391 aaKnown RBP17.97■□□□□ 0.47
SPIDR-221ENST00000523814 CLIC2O15247 247 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 PDGFRBP09619 1106 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 DLATP10515 647 aaKnown RBP17.97■□□□□ 0.47
SPIDR-221ENST00000523814 TNNI1P19237 187 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 TGM1P22735 817 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 CNR2P34972 360 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 ME1P48163 572 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 CYP2J2P51589 502 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 PUM1Q14671 1186 aaKnown RBP eCLIP17.97■□□□□ 0.47
SPIDR-221ENST00000523814 PDGFRLQ15198 375 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 FOXD4L6Q3SYB3 417 aaPredicted RBP17.97■□□□□ 0.47
SPIDR-221ENST00000523814 TMEM196Q5HYL7 178 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 CC2D1AQ6P1N0 951 aaPredicted RBP17.97■□□□□ 0.47
SPIDR-221ENST00000523814 FOXD4L3Q6VB84 417 aaPredicted RBP17.97■□□□□ 0.47
SPIDR-221ENST00000523814 HS2ST1Q7LGA3 356 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 HSCBQ8IWL3 235 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 SCN4BQ8IWT1 228 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 NELFCDQ8IXH7 590 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 C12orf56Q8IXR9 622 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 RIN3Q8TB24 985 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 MYCBPAPQ8TBZ2 947 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 CHFRQ96EP1 664 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 FNBP1Q96RU3 617 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 CYP2S1Q96SQ9 504 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 MMS19Q96T76 1030 aa17.97■□□□□ 0.47
SPIDR-221ENST00000523814 BLZF1Q9H2G9 400 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms