RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TTC39CQ8N584 583 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 SLC4A11Q8NBS3 891 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 RBBP8NLQ8NC74 664 aaPredicted RBP12.7□□□□□ -0.38
PVT1-215ENST00000522963 KREMEN2Q8NCW0 462 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 OR10T2Q8NGX3 314 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 FEZF2Q8TBJ5 459 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 TMEM209Q96SK2 561 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 DPEP3Q9H4B8 488 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 MYO6Q9UM54 1294 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 NCOR1O75376 2440 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 AKR1B15C9JRZ8 316 aaPredicted RBP12.69□□□□□ -0.38
PVT1-215ENST00000522963 DLL1O00548 723 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 CYP26A1O43174 497 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 TBC1D4O60343 1298 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 ATP2C2O75185 946 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 RFPL2O75678 378 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 GFPT2O94808 682 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 CALCAP01258 141 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 TPM1P09493 284 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 CLCN1P35523 988 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 CDR1P51861 262 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 ADKP55263 362 aaKnown RBP12.69□□□□□ -0.38
PVT1-215ENST00000522963 PSMC1P62191 440 aaKnown RBP12.69□□□□□ -0.38
PVT1-215ENST00000522963 CCDC142Q17RM4 750 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 LIN9Q5TKA1 542 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 SMYD5Q6GMV2 418 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 ACOT1Q86TX2 421 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 GPR65Q8IYL9 337 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 THEM5Q8N1Q8 247 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 ZNF397Q8NF99 534 aaPredicted RBP12.69□□□□□ -0.38
PVT1-215ENST00000522963 ANP32BQ92688 251 aaKnown RBP12.69□□□□□ -0.38
PVT1-215ENST00000522963 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 LPIN3Q9BQK8 851 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 SYT15Q9BQS2 421 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 NT5C1AQ9BXI3 368 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 S1PR5Q9H228 398 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 SFXN1Q9H9B4 322 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 PIDD1Q9HB75 910 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 ACP6Q9NPH0 428 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 IMPACTQ9P2X3 320 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 BACE2Q9Y5Z0 518 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 DOCK6Q96HP0 2047 aa12.69□□□□□ -0.38
PVT1-215ENST00000522963 REV3LO60673 3130 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 EYSQ5T1H1 3165 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 CCDC195A0A1B0GUA6 201 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 OR4Q2P0C623 313 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 CPB1P15086 417 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 PTPN1P18031 435 aaKnown RBP12.68□□□□□ -0.38
PVT1-215ENST00000522963 PCSK1P29120 753 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 ELF1P32519 619 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 ROR1Q01973 937 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 ITIH3Q06033 890 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 ARID5BQ14865 1188 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 SMAD2Q15796 467 aaKnown RBP12.68□□□□□ -0.38
PVT1-215ENST00000522963 PPM1LQ5SGD2 360 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 ATAT1Q5SQI0 421 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 SFMBT2Q5VUG0 894 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 IRF2BP2Q7Z5L9 587 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 CRYBG2Q8N1P7 616 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 TC2NQ8N9U0 490 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 OR8K1Q8NGG5 319 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 PDLIM2Q96JY6 352 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 RPGRIP1Q96KN7 1286 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 DNAJC7Q99615 494 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 ACBD6Q9BR61 282 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 ADAM7Q9H2U9 754 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 CRTAC1Q9NQ79 661 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 AIPL1Q9NZN9 384 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 DPP7Q9UHL4 492 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 CDH9Q9ULB4 789 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 C2orf16Q68DN1 1984 aa12.68□□□□□ -0.38
PVT1-215ENST00000522963 MYBPHLA2RUH7 354 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 OR6C75A6NL08 312 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 C8AP07357 584 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 PAEPP09466 180 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 FERP16591 822 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 HNRNPH3P31942 346 aaKnown RBP12.67□□□□□ -0.38
PVT1-215ENST00000522963 ARID5AQ03989 594 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 RAB33AQ14088 237 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 CBX2Q14781 532 aaPredicted RBP12.67□□□□□ -0.38
PVT1-215ENST00000522963 ASIC2Q16515 512 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 INTS6LQ5JSJ4 861 aaKnown RBP12.67□□□□□ -0.38
PVT1-215ENST00000522963 LILRA6Q6PI73 481 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 LRRTM3Q86VH5 581 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 SLC47A2Q86VL8 602 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 CNGA4Q8IV77 575 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 C12orf29Q8N999 325 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 B3GALNT2Q8NCR0 500 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 SLC7A14Q8TBB6 771 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 TFAP2BQ92481 460 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 SMG7Q92540 1137 aaKnown RBP12.67□□□□□ -0.38
PVT1-215ENST00000522963 SYN2Q92777 582 aaPredicted RBP12.67□□□□□ -0.38
PVT1-215ENST00000522963 TNIP3Q96KP6 325 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 HEXIM2Q96MH2 286 aaKnown RBP12.67□□□□□ -0.38
PVT1-215ENST00000522963 RIPOR3Q96MK2 946 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 PGLYRP2Q96PD5 576 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 PKMYT1Q99640 499 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 ZSWIM1Q9BR11 485 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 ZCWPW1Q9H0M4 648 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms