RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TASP1Q9H6P5 420 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 PSMC3IPQ9P2W1 217 aaPredicted RBP16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 BTG3Q14201 252 aaPredicted RBP16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 SMTNL2Q2TAL5 461 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 TIGD7Q6NT04 549 aaPredicted RBP16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 PRUNE1Q86TP1 453 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 TAGAPQ8N103 731 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 BHMTQ93088 406 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 MSCO60682 206 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 CTDNEP1O95476 244 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 ADORA2AP29274 412 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 FDFT1P37268 417 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 FXR1P51114 621 aaKnown RBP eCLIP16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 HIST2H2ACQ16777 129 aaPredicted RBP16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 EPC2Q52LR7 807 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 C6orf10Q5SRN2 563 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 HIST2H2AA3Q6FI13 130 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 TLK2Q86UE8 772 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 SNX31Q8N9S9 440 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 WDR24Q96S15 920 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 DBR1Q9UK59 544 aaKnown RBP16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 CFAP73A6NFT4 308 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 ADM5C9JUS6 153 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 HOXA10P31260 410 aaPredicted RBP16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 PGM5Q15124 567 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 FBXO47Q5MNV8 452 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 SYCP2LQ5T4T6 812 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 CDCA5Q96FF9 252 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 RNF208Q9H0X6 261 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 ZMYM2Q9UBW7 1377 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 PPP3CCP48454 512 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 HNRNPH2P55795 449 aaKnown RBP16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 AGR3Q8TD06 166 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 P2RX7Q99572 595 aaKnown RBP16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 UBXN6Q9BZV1 441 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 SUFUQ9UMX1 484 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 SHMT1P34896 483 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 OXCT1P55809 520 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 LAMTOR4Q0VGL1 99 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 MYBPC2Q14324 1141 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 DACT2Q5SW24 774 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 ANO5Q75V66 913 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 DDI1Q8WTU0 396 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 FAM161BQ96MY7 647 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 LRRC1Q9BTT6 524 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 FRMD8P1Q9BZ68 369 aaPredicted RBP16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 ETNK1Q9HBU6 452 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 TBKBP1A7MCY6 615 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 AMHP03971 560 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 ZNF286BP0CG31 522 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 MTA1Q13330 715 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 PLD1Q13393 1074 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 LRRC14Q15048 493 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 MRNIPQ6NTE8 343 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 HERC6Q8IVU3 1022 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 SUPT3HB4E1H0 165 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 ZSCAN9O15535 394 aaPredicted RBP16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 RHOBTB1O94844 696 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 KRT16P08779 473 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 ZBTB17Q13105 803 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 RGS9BPQ6ZS82 235 aa16.91■□□□□ 0.3
PCDHA3-201ENST00000522353 SYNCRIPO60506 623 aaKnown RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 CABYRO75952 493 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 VCLP18206 1134 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 IL10P22301 178 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 AXLP30530 894 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 VPS37AQ8NEZ2 397 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 REPS2Q8NFH8 660 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 ZNF669Q96BR6 464 aaPredicted RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 SCHIP1Q9P0W5 487 aaPredicted RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 CHMP2BQ9UQN3 213 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 IQSEC1Q6DN90 963 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 EFCAB14O75071 495 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 PMPCBO75439 489 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 SNRPAP09012 282 aaKnown RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 POLE2P56282 527 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 PDK2Q15119 407 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 ZC3H12BQ5HYM0 836 aaKnown RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 TRIM65Q6PJ69 517 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 LRIG3Q6UXM1 1119 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 NIPA1Q7RTP0 329 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 FAM163AQ96GL9 167 aaPredicted RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 C9orf72Q96LT7 481 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 WARS2Q9UGM6 360 aaKnown RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 ITGA11Q9UKX5 1188 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 PLA2G4CQ9UP65 541 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 AAR2Q9Y312 384 aaKnown RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 FAM32AQ9Y421 112 aaKnown RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 BCL9O00512 1426 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 SLC12A8A0AV02 714 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 MYL2P10916 166 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 ERVK-9P63128 1117 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 ERVK-24P63145 666 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 STX3Q13277 289 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 MFSD10Q14728 455 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 CLASP2O75122 1294 aaKnown RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 ALDH5A1P51649 535 aaPredicted RBP16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 GIT2Q14161 759 aa16.9■□□□□ 0.3
PCDHA3-201ENST00000522353 SEC23AQ15436 765 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms