RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 SESTD1Q86VW0 696 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 ARRDC4Q8NCT1 418 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 WNT8BQ93098 351 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 RNF25Q96BH1 459 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 DCLK3Q9C098 648 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 CHST7Q9NS84 486 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 HOMER3Q9NSC5 361 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 ZDHHC18Q9NUE0 388 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 PTPN22Q9Y2R2 807 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 NME7Q9Y5B8 376 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 KPNA7A9QM74 516 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 RPS6KA5O75582 802 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 KRT1P04264 644 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 GYS2P54840 703 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 ZFYVE27Q5T4F4 411 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 PPP1R26Q5T8A7 1209 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 GOLGA6L1Q8N7Z2 621 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 OR6B3Q8NGW1 331 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 PIK3R5Q8WYR1 880 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 FMO2Q99518 471 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 MIS12Q9H081 205 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 KLHL11Q9NVR0 708 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 GDAP2Q9NXN4 497 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 DDX56Q9NY93 547 aaKnown RBP19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 SCN10AQ9Y5Y9 1956 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 DNAH12Q6ZR08 3092 aa19.48■□□□□ 0.71
TRAPPC9-210ENST00000521667 RPLP2P05387 115 aaKnown RBP19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 ASGR1P07306 291 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 PFKMP08237 780 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 CCND3P30281 292 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 FLT3P36888 993 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 TAF6P49848 677 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 SOX4Q06945 474 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 SNX1Q13596 522 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 ANKS1BQ7Z6G8 1248 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 ATG4AQ8WYN0 398 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 SLITRK1Q96PX8 696 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 SENP6Q9GZR1 1112 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 GRHL1Q9NZI5 618 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 ST3GAL5Q9UNP4 418 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 BRCA2P51587 3418 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 A8MXQ7 604 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 PI4K2BG5E9Z4 385 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 SPTLC1O15269 473 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 CTSHP09668 335 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 PRKAR2AP13861 404 aaKnown RBP19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 MAP2K2P36507 400 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 RPL21P46778 160 aaKnown RBP19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 KCNA10Q16322 511 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 POLNQ7Z5Q5 900 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 RPAINQ86UA6 219 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 EMC1Q8N766 993 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 KLHDC9Q8NEP7 349 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 GOLGA2P5Q9HBQ8 144 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 ADAM21Q9UKJ8 722 aa19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 R3HDM2Q9Y2K5 976 aaKnown RBP19.47■□□□□ 0.71
TRAPPC9-210ENST00000521667 CHRNA1P02708 482 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 HSD17B3P37058 310 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 COPS2P61201 443 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 PPP1R7Q15435 360 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 CCNG2Q16589 344 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 SV2CQ496J9 727 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 PKDCCQ504Y2 493 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 ODF2Q5BJF6 829 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 FAM102AQ5T9C2 384 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 TXNRD3NBQ6F5E7 133 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 ZDHHC24Q6UX98 284 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 TMC3Q7Z5M5 1100 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 GRK7Q8WTQ7 553 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 KBTBD7Q8WVZ9 684 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 CHST12Q9NRB3 414 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 FAM49BQ9NUQ9 324 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 FEZ2Q9UHY8 353 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 GOLGA8KD6RF30 607 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 E5RJQ4 531 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 PTGESO14684 152 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 LRCH4O75427 683 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 MYCNP04198 464 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 SETSIPP0DME0 302 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 PLTPP55058 493 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 MGAT3Q09327 533 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 MTMR3Q13615 1198 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 ARHGAP17Q68EM7 881 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 MFSD7Q6UXD7 560 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 SPOCD1Q6ZMY3 1216 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 SYDE1Q6ZW31 735 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 TTC30AQ86WT1 665 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 CFHR5Q9BXR6 569 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 HESX1Q9UBX0 185 aa19.46■□□□□ 0.71
TRAPPC9-210ENST00000521667 TRIP11Q15643 1979 aa19.45■□□□□ 0.7
TRAPPC9-210ENST00000521667 CST5P28325 142 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC9-210ENST00000521667 LRPAP1P30533 357 aa19.45■□□□□ 0.7
TRAPPC9-210ENST00000521667 PTPN7P35236 360 aa19.45■□□□□ 0.7
TRAPPC9-210ENST00000521667 SLC25A11Q02978 314 aaKnown RBP19.45■□□□□ 0.7
TRAPPC9-210ENST00000521667 KRT17Q04695 432 aa19.45■□□□□ 0.7
TRAPPC9-210ENST00000521667 DHX9Q08211 1270 aaKnown RBP19.45■□□□□ 0.7
TRAPPC9-210ENST00000521667 ACAP1Q15027 740 aa19.45■□□□□ 0.7
TRAPPC9-210ENST00000521667 UAP1Q16222 522 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC9-210ENST00000521667 HADHQ16836 314 aaKnown RBP19.45■□□□□ 0.7
TRAPPC9-210ENST00000521667 CCSAPQ6IQ19 270 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms