RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 LAIR1Q6GTX8 287 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 IQCEQ6IPM2 695 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 PRR23CQ6ZRP0 262 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 HAUS6Q7Z4H7 955 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 SPEM1Q8N4L4 309 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 APPL2Q8NEU8 664 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 KCNN1Q92952 543 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 PSMG2Q969U7 264 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 SENP8Q96LD8 212 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 INSM2Q96T92 566 aaPredicted RBP12.01□□□□□ -0.49
CSMD1-210ENST00000521646 SLC46A2Q9BY10 475 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 FAM126AQ9BYI3 521 aaPredicted RBP12.01□□□□□ -0.49
CSMD1-210ENST00000521646 SLITRK6Q9H5Y7 841 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 C17orf75Q9HAS0 396 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 CPSF3Q9UKF6 684 aaKnown RBP12.01□□□□□ -0.49
CSMD1-210ENST00000521646 GREB1Q4ZG55 1949 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 VWA3AA6NCI4 1184 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 SLC30A4O14863 429 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 TM4SF5O14894 197 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 PIGRP01833 764 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 RETP07949 1114 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 CLTAP09496 248 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 HMGA1P17096 107 aaKnown RBP12□□□□□ -0.49
CSMD1-210ENST00000521646 GABRR2P28476 465 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 ZNF131P52739 623 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 INSM1Q01101 510 aaPredicted RBP12□□□□□ -0.49
CSMD1-210ENST00000521646 SIM2Q14190 667 aaPredicted RBP12□□□□□ -0.49
CSMD1-210ENST00000521646 ZC2HC1CQ53FD0 456 aaPredicted RBP12□□□□□ -0.49
CSMD1-210ENST00000521646 PPM1JQ5JR12 505 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 GPR158Q5T848 1215 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 SDHAF4Q5VUM1 108 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 OVOS1Q6IE37 1185 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 FSTL4Q6MZW2 842 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 CRELD2Q6UXH1 353 aaPredicted RBP12□□□□□ -0.49
CSMD1-210ENST00000521646 DTHD1Q6ZMT9 781 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 EFCAB13Q8IY85 973 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 CELF5Q8N6W0 485 aaKnown RBP12□□□□□ -0.49
CSMD1-210ENST00000521646 GIPC2Q8TF65 315 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 RTKNQ9BST9 563 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 ATXN3LQ9H3M9 355 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 PLEKHA5Q9HAU0 1116 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 GMEB2Q9UKD1 530 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 TBX20Q9UMR3 447 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 UBQLN1Q9UMX0 589 aaKnown RBP12□□□□□ -0.49
CSMD1-210ENST00000521646 SPAG17Q6Q759 2223 aa12□□□□□ -0.49
CSMD1-210ENST00000521646 OR6C75A6NL08 312 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 PRR5-ARHGAP8B1AHC4 643 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 ARSAP15289 507 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 TYMPP19971 482 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 CYP3A5P20815 502 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 ADSSP30520 456 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 GMPRP36959 345 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 PTGIRP43119 386 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 CTSOP43234 321 aaPredicted RBP11.99□□□□□ -0.49
CSMD1-210ENST00000521646 ACOT2P49753 483 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 MLLT6P55198 1093 aaPredicted RBP11.99□□□□□ -0.49
CSMD1-210ENST00000521646 HMGN5P82970 282 aaKnown RBP11.99□□□□□ -0.49
CSMD1-210ENST00000521646 ARHGAP8P85298 464 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 KCNA1Q09470 495 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 STRN3Q13033 797 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 C8orf34Q49A92 452 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 SLC39A12Q504Y0 691 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 WSCD1Q658N2 575 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 USP49Q70CQ1 688 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 APBB1IPQ7Z5R6 666 aaPredicted RBP11.99□□□□□ -0.49
CSMD1-210ENST00000521646 ELMOD1Q8N336 334 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 CXorf38Q8TB03 319 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 FAM83CQ9BQN1 747 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 FGFBP2Q9BYJ0 223 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 ZCWPW1Q9H0M4 648 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 MAFFQ9ULX9 164 aa11.99□□□□□ -0.49
CSMD1-210ENST00000521646 NOL7Q9UMY1 257 aaKnown RBP11.99□□□□□ -0.49
CSMD1-210ENST00000521646 OGTO15294 1046 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 F11P03951 625 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 CYP11A1P05108 521 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 MARCKSP29966 332 aaPredicted RBP11.98□□□□□ -0.49
CSMD1-210ENST00000521646 KPNA1P52294 538 aaPredicted RBP11.98□□□□□ -0.49
CSMD1-210ENST00000521646 PPP2R3AQ06190 1150 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 PLD1Q13393 1074 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 GNL2Q13823 731 aaKnown RBP11.98□□□□□ -0.49
CSMD1-210ENST00000521646 MYBPC2Q14324 1141 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 DHX8Q14562 1220 aaKnown RBP11.98□□□□□ -0.49
CSMD1-210ENST00000521646 MCM6Q14566 821 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 CSRP2Q16527 193 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 TCEAL6Q6IPX3 200 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 DSTYKQ6XUX3 929 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 KBTBD6Q86V97 674 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 LONP2Q86WA8 852 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 GPBP1Q86WP2 473 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 GPR161Q8N6U8 529 aaKnown RBP11.98□□□□□ -0.49
CSMD1-210ENST00000521646 LEMD2Q8NC56 503 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 USP13Q92995 863 aaPredicted RBP11.98□□□□□ -0.49
CSMD1-210ENST00000521646 TCEAL3Q969E4 200 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 SLC22A12Q96S37 553 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 SEPT5Q99719 369 aaPredicted RBP11.98□□□□□ -0.49
CSMD1-210ENST00000521646 TCHHQ07283 1943 aa11.98□□□□□ -0.49
CSMD1-210ENST00000521646 IGF2RP11717 2491 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 K7ENM7 598 aa11.97□□□□□ -0.49
CSMD1-210ENST00000521646 LAD1O00515 517 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms