RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 SCN4BQ8IWT1 228 aa21.18■□□□□ 0.98
CERNA3-201ENST00000521403 RDH13Q8NBN7 331 aa21.18■□□□□ 0.98
CERNA3-201ENST00000521403 USP13Q92995 863 aaPredicted RBP21.18■□□□□ 0.98
CERNA3-201ENST00000521403 KIAA1586Q9HCI6 787 aa21.18■□□□□ 0.98
CERNA3-201ENST00000521403 TRPC7Q9HCX4 862 aa21.18■□□□□ 0.98
CERNA3-201ENST00000521403 TDP1Q9NUW8 608 aa21.18■□□□□ 0.98
CERNA3-201ENST00000521403 UXTQ9UBK9 157 aaPredicted RBP21.18■□□□□ 0.98
CERNA3-201ENST00000521403 RAB23Q9ULC3 237 aa21.18■□□□□ 0.98
CERNA3-201ENST00000521403 ZNF638Q14966 1978 aaKnown RBP21.17■□□□□ 0.98
CERNA3-201ENST00000521403 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.17■□□□□ 0.98
CERNA3-201ENST00000521403 GABRDO14764 452 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 POLR2DO15514 142 aaKnown RBP21.17■□□□□ 0.98
CERNA3-201ENST00000521403 DLATP10515 647 aaKnown RBP21.17■□□□□ 0.98
CERNA3-201ENST00000521403 PSMC1P62191 440 aaKnown RBP21.17■□□□□ 0.98
CERNA3-201ENST00000521403 TRIM68Q6AZZ1 485 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 CC2D1AQ6P1N0 951 aaPredicted RBP21.17■□□□□ 0.98
CERNA3-201ENST00000521403 MON1AQ86VX9 555 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 WDR49Q8IV35 697 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 HSCBQ8IWL3 235 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 NELFCDQ8IXH7 590 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 TTC16Q8NEE8 873 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 SNX21Q969T3 373 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 MMS19Q96T76 1030 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 SYT15Q9BQS2 421 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 EBF3Q9H4W6 596 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 AGPAT3Q9NRZ7 376 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 GMEB2Q9UKD1 530 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 KIF26AQ9ULI4 1882 aaPredicted RBP21.17■□□□□ 0.98
CERNA3-201ENST00000521403 DENND4CQ5VZ89 1909 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 CEP250Q9BV73 2442 aa21.17■□□□□ 0.98
CERNA3-201ENST00000521403 ATP2C2O75185 946 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 NOL4O94818 638 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 CASP1P29466 404 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 CYP2J2P51589 502 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 RUNX3Q13761 415 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 CCINQ13939 588 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 SNRNP35Q16560 246 aaKnown RBP21.16■□□□□ 0.98
CERNA3-201ENST00000521403 CFAP221Q4G0U5 840 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 PRR23BQ6ZRT6 265 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 EPM2AIP1Q7L775 607 aaPredicted RBP21.16■□□□□ 0.98
CERNA3-201ENST00000521403 DPH6Q7L8W6 267 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 DGLUCYQ7Z3D6 616 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 ZNF507Q8TCN5 953 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 CCDC127Q96BQ5 260 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 FUBP3Q96I24 572 aaKnown RBP eCLIP21.16■□□□□ 0.98
CERNA3-201ENST00000521403 FNBP1Q96RU3 617 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 C7orf25Q9BPX7 421 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 FAM83CQ9BQN1 747 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 BLZF1Q9H2G9 400 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 KIF9Q9HAQ2 790 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 DNAH14Q0VDD8 3507 aa21.16■□□□□ 0.98
CERNA3-201ENST00000521403 OBSL1O75147 1896 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 CHURC1-FNTBB4DL54 471 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 CLIC2O15247 247 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 TGFB1I1O43294 461 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 TADA3O75528 432 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 ZSCAN22P10073 491 aaPredicted RBP21.15■□□□□ 0.98
CERNA3-201ENST00000521403 TNNI1P19237 187 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 LMO2P25791 158 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 ME1P48163 572 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 FNTBP49356 437 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 DMWDQ09019 674 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 PUM1Q14671 1186 aaKnown RBP eCLIP21.15■□□□□ 0.98
CERNA3-201ENST00000521403 HEATR6Q6AI08 1181 aaKnown RBP21.15■□□□□ 0.98
CERNA3-201ENST00000521403 CNNM4Q6P4Q7 775 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 C4orf50Q6ZRC1 276 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 UNC13DQ70J99 1090 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 GPR161Q8N6U8 529 aaKnown RBP21.15■□□□□ 0.98
CERNA3-201ENST00000521403 SCFD1Q8WVM8 642 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 KBTBD7Q8WVZ9 684 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 MYLPFQ96A32 169 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 TRMT2BQ96GJ1 504 aaKnown RBP21.15■□□□□ 0.98
CERNA3-201ENST00000521403 MYRFLQ96LU7 910 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 MAGEF1Q9HAY2 307 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 HPS4Q9NQG7 708 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 FAM13BQ9NYF5 915 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 CDH9Q9ULB4 789 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 USP18Q9UMW8 372 aa21.15■□□□□ 0.98
CERNA3-201ENST00000521403 UBE4BO95155 1302 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 SOBPA7XYQ1 873 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 F13A1P00488 732 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 PDGFRBP09619 1106 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 ARSAP15289 507 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 AFMP43652 599 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 CYP27A1Q02318 531 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 RSPO4Q2I0M5 234 aaPredicted RBP21.14■□□□□ 0.97
CERNA3-201ENST00000521403 FAM171BQ6P995 826 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 HS2ST1Q7LGA3 356 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 TRAPPC11Q7Z392 1133 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 RIN3Q8TB24 985 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 C2orf42Q9NWW7 574 aa21.14■□□□□ 0.97
CERNA3-201ENST00000521403 MAGEC2Q9UBF1 373 aaPredicted RBP21.14■□□□□ 0.97
CERNA3-201ENST00000521403 TRAV19A0A0A6YYK7 116 aa21.13■□□□□ 0.97
CERNA3-201ENST00000521403 OTOL1A6NHN0 477 aaPredicted RBP21.13■□□□□ 0.97
CERNA3-201ENST00000521403 K7ESF4 209 aa21.13■□□□□ 0.97
CERNA3-201ENST00000521403 CKMP06732 381 aa21.13■□□□□ 0.97
CERNA3-201ENST00000521403 GRIK1P39086 918 aa21.13■□□□□ 0.97
CERNA3-201ENST00000521403 GRSF1Q12849 480 aaKnown RBP eCLIP21.13■□□□□ 0.97
CERNA3-201ENST00000521403 SIM2Q14190 667 aaPredicted RBP21.13■□□□□ 0.97
CERNA3-201ENST00000521403 MAPRE1Q15691 268 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms