RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 DGKEP52429 567 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 ARHGEF7Q14155 803 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 EFR3AQ14156 821 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 SLC29A2Q14542 456 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 GRM7Q14831 915 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 TAF5Q15542 800 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 AMOTQ4VCS5 1084 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 SLC44A4Q53GD3 710 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 MFSD5Q6N075 450 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 CCDC70Q6NSX1 233 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 TCTN3Q6NUS6 607 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 EFCAB12Q6NXP0 572 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 TAF2Q6P1X5 1199 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 MZT2AQ6P582 158 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 MMS22LQ6ZRQ5 1243 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 RFX8Q6ZV50 586 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 TAX1BP1Q86VP1 789 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 KRT73Q86Y46 540 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 TMTC1Q8IUR5 882 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 CPOQ8IVL8 374 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 CCDC28AQ8IWP9 274 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 YAF2Q8IY57 180 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 GALNT15Q8N3T1 639 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 FAM109AQ8N4B1 249 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 NSUN7Q8NE18 718 aaKnown RBP4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 RAPGEF4Q8WZA2 1011 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 HERVK_113Q902F9 699 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 RILPL2Q969X0 211 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 FAM227BQ96M60 508 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 SLC46A1Q96NT5 459 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 GNRHR2Q96P88 292 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 MPHOSPH9Q99550 1183 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 CNPPD1Q9BV87 410 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 KRTAP17-1Q9BYP8 105 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 TRIM5Q9C035 493 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 TWSG1Q9GZX9 223 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 PCDHAC1Q9H158 963 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 PABPC3Q9H361 631 aaKnown RBP4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 RRN3Q9NYV6 651 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 LPAR3Q9UBY5 353 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 CHST2Q9Y4C5 530 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 CEP83Q9Y592 693 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 CDY1Q9Y6F8 540 aa4.08□□□□□ -1.76
HMGN1P28-201ENST00000521340 RAB27BO00194 218 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 ZNF185O15231 689 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 GPR42O15529 346 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 ASNA1O43681 348 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 RAD17O75943 681 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 CSF1RP07333 972 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 ADRB1P08588 477 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 NPPBP16860 134 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 CST5P28325 142 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 SLC5A2P31639 672 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 RPS19P39019 145 aaKnown RBP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 SEC24CP53992 1094 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 MXRA7P84157 204 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 EFEMP1Q12805 493 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 KCNAB1Q14722 419 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 FAM110CQ1W6H9 321 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 PTCHD3Q3KNS1 767 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 TRIM60Q495X7 471 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 DCAF17Q5H9S7 520 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 FBXO47Q5MNV8 452 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 INTS11Q5TA45 600 aaKnown RBP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 ARL6IP4Q66PJ3 421 aaKnown RBP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 ANKRD18AQ8IVF6 992 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 RHOT2Q8IXI1 618 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 FUKQ8N0W3 1084 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 LGI4Q8N135 537 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 MPP5Q8N3R9 675 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 TEX19Q8NA77 164 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 SCAMP5Q8TAC9 235 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 ASB12Q8WXK4 309 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 TMEM176AQ96HP8 235 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 PPM1MQ96MI6 270 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 MED15Q96RN5 788 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 NAP1L4Q99733 375 aaKnown RBP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 SENP7Q9BQF6 1050 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 EIF2AK1Q9BQI3 630 aaKnown RBP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 CPPED1Q9BRF8 314 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 SLC46A2Q9BY10 475 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 TEX101Q9BY14 249 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 TP63Q9H3D4 680 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 C12orf65Q9H3J6 166 aaKnown RBP4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 FAM83DQ9H4H8 585 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 PRDM8Q9NQV8 689 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 LRFN1Q9P244 771 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 SSX2IPQ9Y2D8 614 aa4.07□□□□□ -1.76
HMGN1P28-201ENST00000521340 FAM90A18PA6NE21 464 aa4.06□□□□□ -1.76
HMGN1P28-201ENST00000521340 FAM90A16PA6NEW6 464 aa4.06□□□□□ -1.76
HMGN1P28-201ENST00000521340 MARCH11A6NNE9 402 aa4.06□□□□□ -1.76
HMGN1P28-201ENST00000521340 FAM90A9PA6NNJ1 464 aa4.06□□□□□ -1.76
HMGN1P28-201ENST00000521340 FAM90A5PA8MXJ8 464 aa4.06□□□□□ -1.76
HMGN1P28-201ENST00000521340 PRR5-ARHGAP8B1AHC4 643 aa4.06□□□□□ -1.76
HMGN1P28-201ENST00000521340 AGPSO00116 658 aa4.06□□□□□ -1.76
HMGN1P28-201ENST00000521340 EIF3FO00303 357 aaPredicted RBP4.06□□□□□ -1.76
HMGN1P28-201ENST00000521340 NPHP1O15259 732 aa4.06□□□□□ -1.76
HMGN1P28-201ENST00000521340 VPS4BO75351 444 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms