RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 RANBP17Q9H2T7 1088 aaKnown RBP4.48□□□□□ -1.69
VPS13B-208ENST00000521037 ARHGEF3Q9NR81 526 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 SLC2A4RGQ9NR83 387 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 EPS15L1Q9UBC2 864 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 FBXL21Q9UKT6 434 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 LZTS1Q9Y250 596 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 FPGT-TNNI3KV9GXZ4 949 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 LAMA4Q16363 1823 aa4.48□□□□□ -1.69
VPS13B-208ENST00000521037 PTPRCP08575 1304 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 NF1P21359 2839 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 COL4A2P08572 1712 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 BAZ2AQ9UIF9 1905 aaKnown RBP4.47□□□□□ -1.69
VPS13B-208ENST00000521037 TMEM232C9JQI7 657 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 PPP1R11O60927 126 aaPredicted RBP4.47□□□□□ -1.69
VPS13B-208ENST00000521037 IDH1O75874 414 aaKnown RBP4.47□□□□□ -1.69
VPS13B-208ENST00000521037 ICAM1P05362 532 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 SMIM10L2AP0DMW4 78 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 SMIM10L2BP0DMW5 78 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 GHRP10912 638 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 PBX3P40426 434 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 SARSP49591 514 aaKnown RBP4.47□□□□□ -1.69
VPS13B-208ENST00000521037 RPS6P62753 249 aaKnown RBP4.47□□□□□ -1.69
VPS13B-208ENST00000521037 TROAPQ12815 778 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 HTR4Q13639 388 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 MTERF2Q49AM1 385 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 PAN2Q504Q3 1202 aaKnown RBP4.47□□□□□ -1.69
VPS13B-208ENST00000521037 MARCH8Q5T0T0 291 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 FAM102BQ5T8I3 360 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 BICRALQ6AI39 1079 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 LAIR1Q6GTX8 287 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 NSMFQ6X4W1 530 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 TMEM173Q86WV6 379 aaPredicted RBP4.47□□□□□ -1.69
VPS13B-208ENST00000521037 WDR63Q8IWG1 891 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 C7orf31Q8N865 590 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 COLGALT1Q8NBJ5 622 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 PPTC7Q8NI37 304 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 MRPS27Q92552 414 aaKnown RBP4.47□□□□□ -1.69
VPS13B-208ENST00000521037 CASP10Q92851 521 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 ZBTB10Q96DT7 871 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 TSPAN17Q96FV3 270 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 CEP95Q96GE4 821 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 FCRL3Q96P31 734 aaPredicted RBP4.47□□□□□ -1.69
VPS13B-208ENST00000521037 MKRN2Q9H000 416 aaKnown RBP4.47□□□□□ -1.69
VPS13B-208ENST00000521037 ARMT1Q9H993 441 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 C2orf42Q9NWW7 574 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 MTMR4Q9NYA4 1195 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 FBLN5Q9UBX5 448 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 CLIP2Q9UDT6 1046 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 SYNPO2Q9UMS6 1093 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 PLIN4Q96Q06 1357 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 FLNCQ14315 2725 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 DOCK8Q8NF50 2099 aa4.47□□□□□ -1.69
VPS13B-208ENST00000521037 BOD1L1Q8NFC6 3051 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 H0Y8X5 98 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 TPD52L2O43399 206 aaKnown RBP4.46□□□□□ -1.7
VPS13B-208ENST00000521037 GH1P01241 217 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 CASTP20810 708 aaKnown RBP4.46□□□□□ -1.7
VPS13B-208ENST00000521037 ZNF445P59923 1031 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 MTAPQ13126 283 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 DGKDQ16760 1214 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 ODR4Q5SWX8 454 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 GORABQ5T7V8 394 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 STPG1Q5TH74 334 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 SLFN13Q68D06 897 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 XRRA1Q6P2D8 792 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 BTNL9Q6UXG8 535 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 TMC5Q6UXY8 1006 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 CYP2R1Q6VVX0 501 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 ATP6V0A1Q93050 837 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 PPP2R3CQ969Q6 453 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 ZNF707Q96C28 371 aaPredicted RBP4.46□□□□□ -1.7
VPS13B-208ENST00000521037 PTCHD1Q96NR3 888 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 TCF25Q9BQ70 676 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 MENTQ9BUN1 341 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 OSBPL6Q9BZF3 934 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 IL17RBQ9NRM6 502 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 SETD4Q9NVD3 440 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 IGSF9Q9P2J2 1179 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 SUCOQ9UBS9 1254 aaKnown RBP4.46□□□□□ -1.7
VPS13B-208ENST00000521037 KLK13Q9UKR3 277 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 RAI2Q9Y5P3 530 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 MYO9AB2RTY4 2548 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 LRBAP50851 2863 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 ZNF532Q9HCE3 1301 aa4.46□□□□□ -1.7
VPS13B-208ENST00000521037 FBN3Q75N90 2809 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 SPENQ96T58 3664 aaKnown RBP4.45□□□□□ -1.7
VPS13B-208ENST00000521037 MYH8P13535 1937 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 CSMD1Q96PZ7 3565 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 A0A1W2PQ27 194 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 A0A1W2PQ64 194 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 A0A1W2PQC6 194 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 A0A1W2PQD8 194 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 KANSL1LA0AUZ9 987 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 MBLAC1A4D2B0 266 aaPredicted RBP4.45□□□□□ -1.7
VPS13B-208ENST00000521037 K7ESF4 209 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 B4GALT3O60512 393 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 PPFIA4O75335 1185 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 UBTFL1P0CB47 393 aaPredicted RBP4.45□□□□□ -1.7
VPS13B-208ENST00000521037 CD72P21854 359 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 CD52P31358 61 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms